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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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TCF19
transcription factor 19
Chromosome 6 · 6p21.33
NCBI Gene: 6941Ensembl: ENSG00000137310.13HGNC: HGNC:11629UniProt: A0A1U9X8M7
43PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transcription Factor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingregulation of gene expressionnucleusneurodegenerative diseaseSensorineural hearing impairmentsensorineural hearing losshepatocellular carcinoma
✦AI Summary

TCF19 is a transcription factor that plays critical roles in cell cycle regulation, metabolic homeostasis, and disease pathogenesis. As a transcription factor, TCF19 regulates gene expression by binding to promoter regions and forming complexes with other regulatory proteins 12. In cell cycle control, TCF19 functions as a central regulator of proliferation-related genes and is essential for the G1/S transition, with its downregulation leading to cell cycle arrest 3. TCF19 demonstrates significant involvement in metabolic regulation, particularly in glucose homeostasis and lipid metabolism. It interacts with p53 to co-regulate metabolic genes including TIGAR and SCO2, which control glycolysis and oxidative phosphorylation respectively 2. Additionally, TCF19 associates with TCF7l2 to regulate fatty acid chain elongase HACD3 under lipid-induced stress conditions 4. The protein shows important disease relevance across multiple pathologies. In cancer, TCF19 promotes tumor progression through various mechanisms: facilitating epithelial-mesenchymal transition in breast cancer via the TCF19/miR-199a-5p/SP1/LOXL2 pathway 5, and regulating glycolysis and macrophage M2 polarization in osteosarcoma through CDKN2A upregulation 1. TCF19 is also implicated in cardiovascular disease, where its downregulation contributes to endothelial cell dysfunction during heart failure progression 3, and in intervertebral disc degeneration, where it plays a pivotal role in disease progression 6.

Sources cited
1
TCF19 binds to promoter regions and regulates CDKN2A expression in osteosarcoma
PMID: 40193126
2
TCF19 interacts with p53 to co-regulate metabolic genes TIGAR and SCO2
PMID: 34369624
3
TCF19 is a central regulator of cell cycle-related genes and its downregulation causes cell cycle arrest
PMID: 40962957
4
TCF19 associates with TCF7l2 to regulate fatty acid chain elongase HACD3
PMID: 40172138
5
TCF19 facilitates epithelial-mesenchymal transition in breast cancer through miR-199a-5p/SP1/LOXL2 pathway
PMID: 38851313
6
TCF19 plays a pivotal role in intervertebral disc degeneration progression
PMID: 40341079
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.28Weak
Sensorineural hearing impairmentOpen Targets
0.12Weak
sensorineural hearing lossOpen Targets
0.12Weak
hepatocellular carcinomaOpen Targets
0.09Suggestive
neoplasmOpen Targets
0.08Suggestive
lung cancerOpen Targets
0.08Suggestive
gastric cancerOpen Targets
0.08Suggestive
cancerOpen Targets
0.07Suggestive
thyroid cancerOpen Targets
0.07Suggestive
lumbar disc degenerationOpen Targets
0.07Suggestive
liver cancerOpen Targets
0.06Suggestive
posterior cortical atrophyOpen Targets
0.05Suggestive
obesityOpen Targets
0.04Suggestive
prostate cancerOpen Targets
0.04Suggestive
gliomaOpen Targets
0.04Suggestive
breast cancerOpen Targets
0.03Suggestive
melanomaOpen Targets
0.03Suggestive
colorectal carcinomaOpen Targets
0.03Suggestive
nonpapillary renal cell carcinomaOpen Targets
0.03Suggestive
NephroblastomaOpen Targets
0.02Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
LOC728743Shared pathway100%ATXN7L3BShared pathway100%CAVIN4Shared pathway100%UNCXShared pathway100%DPPA5Shared pathway100%NKAPLShared pathway100%
Tissue Expression6 tissues
Brain
100%
Bone Marrow
61%
Ovary
16%
Lung
14%
Heart
13%
Liver
3%
Gene Interaction Network
Click a node to explore
TCF19LOC728743ATXN7L3BCAVIN4UNCXDPPA5NKAPL
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q9Y242
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.89LoF Tolerant
pLIⓘ
0.02Tolerant
Observed/Expected LoF0.54 [0.34–0.89]
RankingsWhere TCF19 stands among ~20K protein-coding genes
  • #9,802of 20,598
    Most Researched43
  • #7,962of 17,882
    Most Constrained (LOEUF)0.89
Genes detectedTCF19
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Deciphering the TCF19/miR-199a-5p/SP1/LOXL2 pathway: Implications for breast cancer metastasis and epithelial-mesenchymal transition.
PMID: 38851313
Cancer Lett · 2024
1.00
2
TCF19/CDKN2A Regulates Glycolysis and Macrophage M2 Polarization for Osteosarcoma Progression.
PMID: 40193126
FASEB J · 2025
0.90
3
Downregulation of TCF19 and ATAD2 causes endothelial cell cycle arrest at the transition from cardiac hypertrophy to heart failure.
PMID: 40962957
Basic Res Cardiol · 2025
0.80
4
Unveiling the role of TCF19 in intervertebral disc degeneration with single-cell and bulk RNA sequencing.
PMID: 40341079
Sci Rep · 2025
0.70
5
Exon and intron sharing in opposite direction-an undocumented phenomenon in human genome-between Pou5f1 and Tcf19 genes.
PMID: 34610795
BMC Genomics · 2021
0.60