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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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TCF25
TCF25 ribosome quality control complex subunit
Chromosome 16 · 16q24.3
NCBI Gene: 22980Ensembl: ENSG00000141002.21HGNC: HGNC:29181UniProt: Q9BQ70
81PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transcription Factor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
RQC complexregulation of protein K48-linked ubiquitinationrescue of stalled cytosolic ribosomeprotein bindingAbnormality of skin pigmentationskin canceractinic keratosisbreast carcinoma
✦AI Summary

TCF25 is a multifunctional protein serving as a component of the ribosome quality control (RQC) complex and a nutrient sensor. As an RQC complex subunit, TCF25 promotes K48-linked polyubiquitin chain formation during ubiquitination of incompletely synthesized nascent chains by the E3 ligase Listerin, facilitating their proteasomal degradation 1. Mechanistically, TCF25 directly binds the acceptor ubiquitin and orients it to position K48 optimally for conjugation to nascent chains 2. Beyond ribosomal quality control, TCF25 functions as a nutrient sensor that enhances lysosomal acidification via V-ATPase targeting under glucose starvation, promoting autophagy and ATP generation 3. However, prolonged starvation activates ferritinophagy through TCF25, increasing lysosomal membrane permeability and triggering lysosome-dependent cell death 3. In Plasmodium falciparum, TCF25 acts as a transcriptional regulator controlling ribosomal biogenesis and gametocytogenesis 4. Clinically, TCF25 dysregulation associates with age-related hearing loss via altered DNA methylation 5 and colorectal cancer progression, particularly left-sided colon cancer 6. TCF25 deficiency protects against hepatic ischemia-reperfusion injury, suggesting therapeutic potential in metabolic and ischemic disorders 3.

Sources cited
1
TCF25 is a component of the RQC complex required to promote K48-linked polyubiquitin chain formation during ubiquitination of incompletely synthesized proteins
PMID: 30244831
2
TCF25 imposes K48 specificity by binding and orienting the acceptor ubiquitin to position K48 for direct attack on the E2-Ub conjugate
PMID: 40169231
3
TCF25 functions as a nutrient sensor enhancing lysosomal acidification via V-ATPase targeting under glucose starvation, promoting autophagy; prolonged starvation activates ferritinophagy leading to lysosome-dependent cell death
PMID: 40844875
4
TCF25 regulates gametocytogenesis and ribosomal biogenesis in Plasmodium falciparum by controlling rRNA expression and ribosomal subunit homeostasis
PMID: 41210950
5
TCF25 CpG methylation is highly methylated in presbycusis patients and correlates with age-related hearing loss
PMID: 40428348
6
TCF25 is identified as a dominant genomic feature associated with left-sided colon cancer in multi-omics analysis
PMID: 39731152
Disease Associationsⓘ20
Abnormality of skin pigmentationOpen Targets
0.28Weak
skin cancerOpen Targets
0.20Weak
actinic keratosisOpen Targets
0.16Weak
breast carcinomaOpen Targets
0.16Weak
basal cell carcinomaOpen Targets
0.13Weak
skin neoplasmOpen Targets
0.13Weak
squamous cell carcinomaOpen Targets
0.11Weak
skin diseaseOpen Targets
0.11Weak
diabetes mellitusOpen Targets
0.11Weak
cutaneous melanomaOpen Targets
0.11Weak
seborrheic keratosisOpen Targets
0.10Weak
type 2 diabetes mellitusOpen Targets
0.09Suggestive
functional lateralityOpen Targets
0.07Suggestive
cardiac hypertrophyOpen Targets
0.07Suggestive
bipolar disorderOpen Targets
0.07Suggestive
melanomaOpen Targets
0.06Suggestive
phototoxic dermatitisOpen Targets
0.05Suggestive
handednessOpen Targets
0.04Suggestive
Testicular regression syndromeOpen Targets
0.04Suggestive
mathematical abilityOpen Targets
0.04Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
GPRASP2Protein interaction99%LTN1Protein interaction85%VCPProtein interaction83%ANKZF1Protein interaction80%NEMFProtein interaction79%SAT1Protein interaction76%
Tissue Expression6 tissues
Ovary
100%
Lung
99%
Bone Marrow
94%
Liver
83%
Brain
67%
Heart
64%
Gene Interaction Network
Click a node to explore
TCF25GPRASP2LTN1VCPANKZF1NEMFSAT1
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q9BQ70
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.67LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.52 [0.40–0.67]
RankingsWhere TCF25 stands among ~20K protein-coding genes
  • #5,906of 20,598
    Most Researched81
  • #4,961of 17,882
    Most Constrained (LOEUF)0.67
Genes detectedTCF25
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Distinct microbes, metabolites, and the host genome define the multi-omics profiles in right-sided and left-sided colon cancer.
PMID: 39731152
Microbiome · 2024
1.00
2
Transcription factor 25 modulates gametocytogenesis and ribosome biogenesis in the malaria parasite
PMID: 41210950
Front Cell Infect Microbiol · 2025
0.90
3
TCF25 serves as a nutrient sensor to orchestrate metabolic adaptation and cell death by enhancing lysosomal acidification under glucose starvation.
PMID: 40844875
Cell Rep · 2025
0.80
4
The ribosome-associated quality control factor TCF25 imposes K48 specificity on Listerin-mediated ubiquitination of nascent chains by binding and specifically orienting the acceptor ubiquitin.
PMID: 40169231
Genes Dev · 2025
0.70
5
Whole-Genome DNA Methylation Analysis in Age-Related Hearing Loss.
PMID: 40428348
Genes (Basel) · 2025
0.60