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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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TFIP11
tuftelin interacting protein 11
Chromosome 22 · 22q12.1
NCBI Gene: 24144Ensembl: ENSG00000100109.18HGNC: HGNC:17165UniProt: Q9UBB9
139PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
nucleolusnegative regulation of protein-containing complex assemblynuclear speckprotein bindingneurodegenerative diseasemalunion fractureskin cancerneoplasm
✦AI Summary

TFIP11 (tuftelin interacting protein 11) is a multifunctional spliceosomal protein with primary roles in pre-mRNA splicing and spliceosome regulation. Its canonical function involves spliceosome disassembly, where TFIP11 cooperates with the RNA helicase DHX15 to detect mRNA release and initiate disassembly of terminal intron lariat spliceosomes 1. TFIP11 contains a conserved G-patch domain essential for DHX15 interaction and recruits DHX15 to catalytic U6 snRNA to promote lariat-intron release 2. Beyond disassembly, TFIP11 has DHX15-independent functions in U6 snRNA 2'-O-methylation and U4/U6.U5 tri-snRNP assembly, localizing to nucleoli and Cajal bodies to facilitate these processes 3. Structurally, TFIP11 is an intrinsically disordered protein with salt-responsive conformational properties that promote protein-protein and protein-RNA interactions 4. Clinically, TFIP11 genetic variants associate with dental phenotypes: SNPs in TFIP11 correlate with low caries trajectory 5 and represent risk factors for dental fluorosis susceptibility 67. TFIP11 functions within interactive genetic networks regulating enamel development and caries pathogenesis 8, highlighting its relevance to orofacial biology and potential biomarker utility in predicting individual disease susceptibility.

Sources cited
1
TFIP11 cooperates with DHX15 to initiate spliceosome disassembly by detecting mRNA release and docking on U6 snRNA
PMID: 38925148
2
TFIP11 contains a G-patch domain for DHX15 interaction, a novel nuclear localization signal, and nuclear speckle-targeting sequence
PMID: 19857462
3
TFIP11 has DHX15-independent roles in U6 snRNA 2'-O-methylation, U4/U6.U5 tri-snRNP assembly, and splicing fidelity
PMID: 34789764
4
TFIP11 is an intrinsically disordered protein with salt-dependent conformational flexibility favoring protein-RNA interactions
PMID: 39089542
5
TFIP11 rs5997096 SNP associates with low caries trajectory across the life course
PMID: 37031884
6
TFIP11 rs5997096 polymorphism associates with dental fluorosis susceptibility
PMID: 29207377
7
TFIP11 SNPs are identified as risk factors for dental fluorosis
PMID: 36354656
8
TFIP11 is part of interactive genetic networks with multiple genes associated with dental caries
PMID: 31476523
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.49Moderate
malunion fractureOpen Targets
0.24Weak
skin cancerOpen Targets
0.24Weak
neoplasmOpen Targets
0.09Suggestive
non-small cell lung carcinomaOpen Targets
0.08Suggestive
hepatocellular carcinomaOpen Targets
0.07Suggestive
gastric cancerOpen Targets
0.06Suggestive
posterior cortical atrophyOpen Targets
0.05Suggestive
prostate cancerOpen Targets
0.04Suggestive
lung cancerOpen Targets
0.03Suggestive
episodic memoryOpen Targets
0.03Suggestive
dental cariesOpen Targets
0.03Suggestive
colitisOpen Targets
0.02Suggestive
Alzheimer diseaseOpen Targets
0.02Suggestive
acute lymphoblastic leukemiaOpen Targets
0.02Suggestive
Malignant Pancreatic NeoplasmOpen Targets
0.02Suggestive
depressive disorderOpen Targets
0.01Suggestive
cancerOpen Targets
0.01Suggestive
AnxietyOpen Targets
0.01Suggestive
prostate intraepithelial neoplasiaOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SNW1Protein interaction100%SNRPFProtein interaction100%SYF2Protein interaction100%CDC5LProtein interaction100%CWC15Protein interaction100%PRPF8Protein interaction100%
Tissue Expression6 tissues
Bone Marrow
100%
Heart
41%
Liver
41%
Lung
38%
Brain
38%
Ovary
26%
Gene Interaction Network
Click a node to explore
TFIP11SNW1SNRPFSYF2CDC5LCWC15PRPF8
PROTEIN STRUCTURE
Preparing viewer…
PDB8RO2 · 3.50 Å · EM
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.02LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.85 [0.71–1.02]
RankingsWhere TFIP11 stands among ~20K protein-coding genes
  • #3,325of 20,598
    Most Researched139 · top quartile
  • #9,981of 17,882
    Most Constrained (LOEUF)1.02
Genes detectedTFIP11
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Mechanism for the initiation of spliceosome disassembly.
PMID: 38925148
Nature · 2024
1.00
2
Identification of a novel nuclear localization signal and speckle-targeting sequence of tuftelin-interacting protein 11, a splicing factor involved in spliceosome disassembly.
PMID: 19857462
Biochem Biophys Res Commun · 2009
0.90
3
DHX15-independent roles for TFIP11 in U6 snRNA modification, U4/U6.U5 tri-snRNP assembly and pre-mRNA splicing fidelity.
PMID: 34789764
Nat Commun · 2021
0.80
4
Impact of tooth mineral tissues genes on dental caries: A birth-cohort study.
PMID: 37031884
J Dent · 2023
0.70
5
Polymorphisms in Nonamelogenin Enamel Matrix Genes Are Associated with Dental Fluorosis.
PMID: 29207377
Caries Res · 2018
0.60