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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 15 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
THAP11
THAP domain containing 11
Chromosome 16 Β· 16q22.1
NCBI Gene: 57215Ensembl: ENSG00000168286.3HGNC: HGNC:23194UniProt: Q96EK4
71PubMed Papers
22Diseases
0Drugs
1Pathogenic Variants
FUNCTIONAL ROLE
Transcription Factor
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
zinc ion bindingnegative regulation of transcription by RNA polymerase IInucleoplasmcore promoter sequence-specific DNA bindingneurodegenerative diseasespinocerebellar ataxia 51methylmalonic aciduria and homocystinuria, cb1L typemethylmalonic acidemia with homocystinuria, type cblX
✦AI Summary

THAP11 is a zinc-finger transcription factor that serves dual roles in transcriptional regulation and chr16 accessibility modulation 1. Acting as both an activator and repressor of RNA polymerase II-dependent transcription, THAP11 functions within a complex with HCFC1 and ZNF143 to regulate diverse target genes and controls cobalamin metabolism through MMACHC gene expression regulation 2. The protein plays critical roles in cell growth and proliferation, with THAP11 alterations causing severe growth defects in cultured cells 2. Clinically, THAP11 mutations cause two distinct disease phenotypes. Biallelic loss-of-function mutations result in methylmalonic aciduria and homocystinuria type cblL, an inborn cobalamin disorder characterized by impaired MMACHC transcription 2. Conversely, pathogenic CAG trinucleotide repeat expansions (45-100 repeats) cause spinocerebellar ataxia 51 (SCA51), a late-onset neurodegenerative disorder 3. SCA51 involves gain-of-function mechanisms whereby mutant THAP11 with polyglutamine expansion forms cytoplasmic aggregates and triggers TREM2-mediated microglial activation, leading to cerebellar neurodegeneration 4. These findings establish THAP11 as essential for normal neural development and cellular metabolism, with distinct pathogenic mechanisms underlying different mutation classes.

Sources cited
1
THAP11 functions as a transcription factor with both activation and repression activities; THAP11F80L mutation impairs MMACHC transcription causing cobalamin disorder; THAP11 alterations affect cell proliferation
PMID: 31905202
2
THAP11 modulates global chromatin accessibility through transcriptional regulation
PMID: 38361031
3
CAG repeat expansion in THAP11 (45-100 repeats in patients) causes spinocerebellar ataxia 51 with intracellular protein aggregation
PMID: 37148549
4
Mutant THAP11 with polyQ expansion causes cerebellar neurodegeneration through gain-of-function mechanisms and enhances TREM2 transcription, triggering microglial activation
PMID: 40459937
5
THAP11 identified as a top predicted transcription factor in CD4+ T cell dysfunction networks in systemic lupus erythematosus
PMID: 36738683
Disease Associationsβ“˜22
neurodegenerative diseaseOpen Targets
0.53Moderate
spinocerebellar ataxia 51Open Targets
0.46Moderate
methylmalonic aciduria and homocystinuria, cb1L typeOpen Targets
0.33Weak
methylmalonic acidemia with homocystinuria, type cblXOpen Targets
0.27Weak
AtaxiaOpen Targets
0.04Suggestive
gastric cancerOpen Targets
0.04Suggestive
malnutritionOpen Targets
0.04Suggestive
Abnormality of the skeletal systemOpen Targets
0.03Suggestive
esophageal cancerOpen Targets
0.02Suggestive
infectionOpen Targets
0.02Suggestive
metabolic syndromeOpen Targets
0.02Suggestive
chronic myelogenous leukemiaOpen Targets
0.02Suggestive
autosomal dominant cerebellar ataxiaOpen Targets
0.02Suggestive
melanomaOpen Targets
0.01Suggestive
nervous system diseaseOpen Targets
0.01Suggestive
hepatocellular carcinomaOpen Targets
0.01Suggestive
cancerOpen Targets
0.01Suggestive
neoplasmOpen Targets
0.01Suggestive
triple-negative breast cancerOpen Targets
0.01Suggestive
cerebellar ataxiaOpen Targets
0.01Suggestive
Methylmalonic aciduria and homocystinuria type cblLUniProt
Spinocerebellar ataxia 51UniProt
Pathogenic Variants1
NM_020457.3(THAP11):c.240C>G (p.Phe80Leu)Likely pathogenic
Methylmalonic acidemia with homocystinuria, type cblX|Disorders of Intracellular Cobalamin Metabolism|Methylmalonic aciduria and homocystinuria, cb1L type
β˜…β˜†β˜†β˜†2016β†’ Residue 80
View on ClinVar β†—
Related Genes
THAP1Protein interaction96%THAP7Protein interaction96%THAP4Protein interaction91%THAP2Protein interaction89%THAP12Protein interaction89%THAP3Protein interaction89%
Tissue Expression6 tissues
Brain
100%
Heart
95%
Ovary
85%
Lung
79%
Liver
59%
Bone Marrow
34%
Gene Interaction Network
Click a node to explore
THAP11THAP1THAP7THAP4THAP2THAP12THAP3
PROTEIN STRUCTURE
Preparing viewer…
PDB5AJS Β· 2.30 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.68LoF Tolerant
pLIβ“˜
0.52Intermediate
Observed/Expected LoF0.38 [0.22–0.68]
RankingsWhere THAP11 stands among ~20K protein-coding genes
  • #6,683of 20,598
    Most Researched71
  • #4,997of 5,498
    Most Pathogenic Variants1
  • #5,071of 17,882
    Most Constrained (LOEUF)0.68
Genes detectedTHAP11
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Integrated analysis of ATAC-seq and RNA-seq reveals the transcriptional regulation network in SLE.
PMID: 36738683
Int Immunopharmacol Β· 2023
1.00
2
Mutant THAP11 causes cerebellar neurodegeneration and triggers TREM2-mediated microglial activation in mice.
PMID: 40459937
J Clin Invest Β· 2025
0.90
3
An Update on the Adult-Onset Hereditary Cerebellar Ataxias: Novel Genetic Causes and New Diagnostic Approaches.
PMID: 38760634
Cerebellum Β· 2024
0.80
4
CAG Repeat Expansion in THAP11 Is Associated with a Novel Spinocerebellar Ataxia.
PMID: 37148549
Mov Disord Β· 2023
0.70
5
Recent Advances in the Genetics of Ataxias: An Update on Novel Autosomal Dominant Repeat Expansions.
PMID: 39820740
Curr Neurol Neurosci Rep Β· 2025
0.60