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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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TLCD3A
TLC domain containing 3A
Chromosome 17 · 17p13.3
NCBI Gene: 79850Ensembl: ENSG00000167695.15HGNC: HGNC:29646UniProt: I3L336
24PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingplasma membranelipid homeostasisendoplasmic reticulumalcohol drinkingprostate carcinomaFraser syndromeprostate cancer
✦AI Summary

TLCD3A (also known as CT120) is a plasma membrane-associated protein localized to chromosome 17.3 that plays a critical role in lung carcinogenesis. The gene encodes a 257-amino acid protein with seven transmembrane domains and functions as a membrane-associated transporter involved in amino acid transport and glutathione metabolism 1. TLCD3A interacts with SLC3A2 and GGTL3B, suggesting roles in cellular nutrient homeostasis 1. Functionally, TLCD3A promotes cell proliferation through activation of Raf/MEK/Erk and PI3K/Akt signaling cascades 2. The gene is notably absent from normal lung tissue but highly expressed in lung cancer cell lines and primary lung tumors 34. TLCD3A overexpression enhances cell proliferation in vitro and tumorigenicity in vivo, while silencing reduces cyclin D1/Cdk4 expression and increases p53 and caspase-3, suppressing growth and sensitizing cells to apoptosis 54. An alternative splice variant, CT120B, exhibits antagonistic effects, inhibiting cell growth through delayed G1/S phase transition 6. Beyond lung cancer, TLCD3A was identified as a diagnostic biomarker in ulcerative colitis 7. These findings suggest TLCD3A as a potential therapeutic target for lung cancer treatment.

Sources cited
1
TLCD3A is a plasma membrane-associated protein with 257 amino acids that interacts with amino acid transporters (SLC3A2) and glutathione metabolism enzymes (GGTL3B)
PMID: 12270127
2
TLCD3A promotes cell proliferation through activation of Raf/MEK/Erk and PI3K/Akt signaling pathways and upregulates tumor metastasis-associated genes
PMID: 15625016
3
TLCD3A is absent in normal lung tissue but abundantly expressed in lung cancer cell lines and primary lung cancers, promoting cell proliferation
PMID: 12600281
4
Silencing TLCD3A inhibits lung cancer cell growth by reducing cyclin D1/Cdk4 and increasing p53 and caspase-3 expression
PMID: 20024628
5
TLCD3A knockdown suppresses lung cancer cell growth, reduces tumorigenicity, and sensitizes cells to ultraviolet-induced apoptosis
PMID: 15927361
6
Alternative splice variant CT120B has antagonistic effects on cell growth compared to full-length CT120A, with six transmembrane domains instead of seven
PMID: 16143812
7
TLCD3A is identified as a diagnostic biomarker in ulcerative colitis through comprehensive gene expression analysis
PMID: 37055577
Disease Associationsⓘ20
alcohol drinkingOpen Targets
0.40Weak
prostate carcinomaOpen Targets
0.13Weak
Fraser syndromeOpen Targets
0.11Weak
prostate cancerOpen Targets
0.08Suggestive
hepatocellular carcinomaOpen Targets
0.08Suggestive
cervical cancerOpen Targets
0.07Suggestive
neoplasmOpen Targets
0.05Suggestive
asthmaOpen Targets
0.04Suggestive
type 2 diabetes mellitusOpen Targets
0.04Suggestive
lung cancerOpen Targets
0.03Suggestive
posterior cortical atrophyOpen Targets
0.02Suggestive
cancerOpen Targets
0.02Suggestive
clear cell renal carcinomaOpen Targets
0.02Suggestive
color vision disorderOpen Targets
0.02Suggestive
head and neck squamous cell carcinomaOpen Targets
0.02Suggestive
head and neck malignant neoplasiaOpen Targets
0.01Suggestive
colorectal cancerOpen Targets
0.01Suggestive
ulcerative colitisOpen Targets
0.01Suggestive
cutaneous lupus erythematosusOpen Targets
0.01Suggestive
colorectal carcinomaOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
TLCD4Shared pathway100%CCDC127Shared pathway100%GGT7Protein interaction93%SLC3A2Protein interaction85%TM6SF2Shared pathway50%TLCD3BShared pathway50%
Tissue Expression6 tissues
Ovary
100%
Brain
95%
Lung
92%
Heart
70%
Bone Marrow
49%
Liver
34%
Gene Interaction Network
Click a node to explore
TLCD3ATLCD4CCDC127GGT7SLC3A2TM6SF2TLCD3B
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q8TBR7
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.94LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.62 [0.43–0.94]
RankingsWhere TLCD3A stands among ~20K protein-coding genes
  • #13,332of 20,598
    Most Researched24
  • #8,712of 17,882
    Most Constrained (LOEUF)0.94
Genes detectedTLCD3A
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Identification of diagnostic biomarks and immune cell infiltration in ulcerative colitis.
PMID: 37055577
Sci Rep · 2023
1.00
2
[Expression of human novel gene CT120 in lung cancer and its effects on cell growth].
PMID: 12600281
Ai Zheng · 2003
0.90
3
Altered gene expression profiles of NIH3T3 cells regulated by human lung cancer associated gene CT120.
PMID: 15625016
Cell Res · 2004
0.80
4
Isolation, polymorphism studies and radiation hybrid mapping of the porcine homologue of human membrane-associated protein (CT120) gene.
PMID: 15670136
Anim Genet · 2005
0.70
5
Molecular cloning and characterization of CT120, a novel membrane-associated gene involved in amino acid transport and glutathione metabolism.
PMID: 12270127
Biochem Biophys Res Commun · 2002
0.60