HomeAboutRankingsData Sources
© 2026 GeneE
🧬
GeneE
9 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
ⓘGeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
TMEM258
transmembrane protein 258
Chromosome 11 · 11q12.2
NCBI Gene: 746Ensembl: ENSG00000134825.17HGNC: HGNC:1164UniProt: P61165
40PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein N-linked glycosylationprotein secretionresponse to endoplasmic reticulum stressprotein bindingdengue diseaseCOVID-19colorectal cancervenous thromboembolism
✦AI Summary

TMEM258 is a transmembrane subunit of the oligosaccharyl transferase (OST) complex that catalyzes N-linked protein glycosylation in the endoplasmic reticulum (ER) 1. As a component of OST-A, TMEM258 interacts with catalytic subunit STT3A and facilitates ribosome binding through a four-helix bundle structure, enabling cotranslational glycan transfer onto nascent secretory proteins 1. All OST subunits, including TMEM258, are required for maximal enzyme activity 2. Mechanistically, TMEM258 is essential for ER quality control and intestinal homeostasis. Tmem258 haploinsufficiency in mice causes severe intestinal inflammation during colitis, while homozygous deficiency in colonic organoids triggers unresolved ER stress and apoptosis 2. Beyond its enzymatic role, TMEM258 modulates immune infiltration networks, positively correlating with M1 macrophages and plasma cells while negatively correlating with neutrophils and naïve CD8+ T cells 3. Clinically, TMEM258 represents a shared susceptibility gene for Crohn disease and acute pancreatitis co-morbidity, increasing AP risk in CD patients by reducing T cell infiltration 3. Genetic variants in TMEM258 also associate with colorectal cancer risk through CD4+ T cell gene expression changes 4 and modulate serum lipid levels through adipose tissue transcriptional regulation 5. Additionally, TMEM258 genetic variants link to polyunsaturated fatty acid metabolism perturbations associated with cancer risk 6.

Sources cited
1
TMEM258 is a subunit of OST-A that interacts with STT3A and enables ribosome binding for cotranslational glycosylation
PMID: 31831667
2
TMEM258 is required for OST complex function, ER quality control, and intestinal homeostasis; its deficiency causes ER stress and intestinal inflammation
PMID: 27974209
3
TMEM258 is a shared susceptibility gene for Crohn disease and acute pancreatitis that modulates immune cell infiltration patterns
PMID: 41054129
4
TMEM258 expression in CD4+ T cells causally associates with colorectal cancer risk
PMID: 40974097
5
TMEM258 genetic variants regulate adipose tissue expression and associate with serum triglyceride and HDL-cholesterol levels
PMID: 28844666
6
TMEM258 genetic variants associate with polyunsaturated fatty acid metabolism signatures linked to cancer risk
PMID: 41637936
Disease Associationsⓘ20
dengue diseaseOpen Targets
0.50Moderate
COVID-19Open Targets
0.37Weak
colorectal cancerOpen Targets
0.25Weak
venous thromboembolismOpen Targets
0.25Weak
asthmaOpen Targets
0.23Weak
type 2 diabetes mellitusOpen Targets
0.22Weak
coronary artery diseaseOpen Targets
0.21Weak
skin agingOpen Targets
0.20Weak
metabolic diseaseOpen Targets
0.20Weak
aortic stenosisOpen Targets
0.20Weak
Abnormality of the liverOpen Targets
0.20Weak
hypothyroidismOpen Targets
0.20Weak
HypercholesterolemiaOpen Targets
0.20Weak
polyp of colonOpen Targets
0.19Weak
heart failureOpen Targets
0.18Weak
strokeOpen Targets
0.18Weak
diabetes mellitusOpen Targets
0.18Weak
inflammatory bowel diseaseOpen Targets
0.18Weak
cholelithiasisOpen Targets
0.18Weak
atherosclerosisOpen Targets
0.18Weak
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SEC61GProtein interaction100%SEC61A1Protein interaction100%SSR2Protein interaction100%DDOSTProtein interaction100%SSR4Protein interaction99%RPN1Protein interaction99%
Tissue Expression6 tissues
Liver
100%
Ovary
99%
Brain
87%
Lung
86%
Bone Marrow
62%
Heart
61%
Gene Interaction Network
Click a node to explore
TMEM258SEC61GSEC61A1SSR2DDOSTSSR4RPN1
PROTEIN STRUCTURE
Preparing viewer…
PDB6S7O · 3.50 Å · EM
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.70LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF1.06 [0.66–1.70]
RankingsWhere TMEM258 stands among ~20K protein-coding genes
  • #10,254of 20,598
    Most Researched40
  • #16,089of 17,882
    Most Constrained (LOEUF)1.70
Genes detectedTMEM258
Sources retrieved9 papers
Response time—
📄 Sources
9▼
1
Cryo-electron microscopy structures of human oligosaccharyltransferase complexes OST-A and OST-B.
PMID: 31831667
Science · 2019
1.00
2
TMEM258 modulates immune infiltration networks underlying co-susceptibility to Crohn disease and acute pancreatitis.
PMID: 41054129
Medicine (Baltimore) · 2025
0.89
3
TMEM258 Is a Component of the Oligosaccharyltransferase Complex Controlling ER Stress and Intestinal Inflammation.
PMID: 27974209
Cell Rep · 2016
0.78
4
Prioritizing putative influential genes in cardiovascular disease susceptibility by applying tissue-specific Mendelian randomization.
PMID: 30704512
Genome Med · 2019
0.67
5
Transcriptome-wide Mendelian randomization exploring dynamic CD4+ T cell gene expression in colorectal cancer development.
PMID: 40974097
J Leukoc Biol · 2025
0.56