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4 sources retrieved Β· Most recent: April 2026 Β· Index updated 15 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
TRAM1L1
translocation associated membrane protein 1 like 1
Chromosome 4 Β· 4q26
NCBI Gene: 133022Ensembl: ENSG00000174599.5HGNC: HGNC:28371UniProt: Q8N609
14PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
protein bindingprotein insertion into ER membraneendoplasmic reticulum membraneSRP-dependent cotranslational protein targeting to membrane, translocationurinary bladder cancerepilepsyliver diseasesmoking initiation
✦AI Summary

TRAM1L1 (translocation associated membrane protein 1 like 1) is a protein located on chromosome 4 that functions in endoplasmic reticulum (ER) membrane protein insertion and translocation of secretory proteins 1. The gene encodes a protein with established roles in protein binding and ER membrane interactions [GO annotations provided]. While TRAM1L1's primary biochemical function relates to ER protein translocation, genetic association studies have identified variants near TRAM1L1 linked to complex disease phenotypes. A genome-wide association study identified a significant association between the rs76957229 SNP near TRAM1L1 and Coprococcus comes abundance in the gut microbiome, with reduced C. comes levels observed in chr4 widespread pain cases 1. Additionally, variants downstream of TRAM1L1 (rs34043524) were associated with right lateral ventricular volume and lifetime alcohol abuse or dependence in a PTSD cohort, with both TRAM1L1 and associated genes implicated in neuronal function 2. Somatic mutations in TRAM1L1 have been identified exclusively in embryonal carcinoma subtype of testicular germ cell tumors 3. These findings suggest TRAM1L1 genetic variation may influence both gut microbiota composition and brain volume phenotypes relevant to psychiatric and pain conditions, though mechanisms remain unclear.

Sources cited
1
GWAS identified rs76957229 SNP near TRAM1L1 associated with Coprococcus comes abundance; C. comes depletion in chronic widespread pain cases
PMID: 33331911
2
SNPs downstream of TRAM1L1 (rs34043524) associated with right lateral ventricular volume and alcohol abuse in PTSD; TRAM1L1 implicated in neuronal function
PMID: 29187748
3
Somatic mutations in TRAM1L1 occur exclusively in embryonal carcinoma subtype of testicular germ cell tumors
PMID: 36713456
4
FISH-mapping localized TRAM1L1 to sheep chromosome 6q13dist; comparative cytogenetic analysis with human chromosome 4
PMID: 19372676
⚠Limited data available β€” This gene has 4 indexed publications. Summary and analysis may be incomplete.
Disease Associationsβ“˜20
urinary bladder cancerOpen Targets
0.33Weak
epilepsyOpen Targets
0.31Weak
liver diseaseOpen Targets
0.30Weak
smoking initiationOpen Targets
0.25Weak
chronic laryngitisOpen Targets
0.20Weak
Abruptio PlacentaeOpen Targets
0.20Weak
response to polyunsaturated fatty acid supplementationOpen Targets
0.20Weak
viral diseaseOpen Targets
0.20Weak
heart diseaseOpen Targets
0.19Weak
cardiovascular diseaseOpen Targets
0.19Weak
bipolar disorderOpen Targets
0.18Weak
atrial fibrillationOpen Targets
0.17Weak
pyogenic granulomaOpen Targets
0.17Weak
atrial flutterOpen Targets
0.17Weak
knee fractureOpen Targets
0.17Weak
chronic venous hypertensionOpen Targets
0.16Weak
hyperpituitarismOpen Targets
0.08Suggestive
ataxia telangiectasiaOpen Targets
0.01Suggestive
schizophreniaOpen Targets
0.01Suggestive
embryonal carcinomaOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar β†—
Related Genes
TRAM1Protein interaction75%TRAM2Shared pathway67%GET3Shared pathway33%SEC61A2Shared pathway25%WDR83OSShared pathway25%ZFAND2BShared pathway20%
Tissue Expression6 tissues
Brain
100%
Ovary
37%
Heart
37%
Bone Marrow
17%
Lung
10%
Liver
3%
Gene Interaction Network
Click a node to explore
TRAM1L1TRAM1TRAM2GET3SEC61A2WDR83OSZFAND2B
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt Q8N609
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
1.64LoF Tolerant
pLIβ“˜
0.45Tolerant
Observed/Expected LoF0.00 [0.00–1.64]
RankingsWhere TRAM1L1 stands among ~20K protein-coding genes
  • #16,030of 20,598
    Most Researched14
  • #15,820of 17,882
    Most Constrained (LOEUF)1.64
Genes detectedTRAM1L1
Sources retrieved4 papers
Response timeβ€”
πŸ“„ Sources
4
1
An association between chronic widespread pain and the gut microbiome.
PMID: 33331911
Rheumatology (Oxford) Β· 2021
1.00
2
Genome-wide association study of subcortical brain volume in PTSD cases and trauma-exposed controls.
PMID: 29187748
Transl Psychiatry Β· 2017
0.75
3
FISH-mapping comparison between river buffalo chromosome 7 and sheep chromosome 6: assignment of new loci and comparison with HSA4.
PMID: 19372676
Cytogenet Genome Res Β· 2009
0.50
4
Comprehensive characteristics of pathological subtypes in testicular germ cell tumor: Gene expression, mutation and alternative splicing.
PMID: 36713456
Front Immunol Β· 2022
0.25