HomeAboutRankingsData Sources
© 2026 GeneE
🧬
GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
ⓘGeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
TRIM47
tripartite motif containing 47
Chromosome 17 · 17q25.1
NCBI Gene: 91107Ensembl: ENSG00000132481.8HGNC: HGNC:19020UniProt: Q96LD4
51PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
ubiquitin-protein transferase activityprotein ubiquitinationcytosolregulation of postsynapse assemblycerebral small vessel diseasehypothyroidismpsoriasishypertension
✦AI Summary

TRIM47 is an E3 ubiquitin ligase that plays critical roles in multiple cellular processes through protein ubiquitination and degradation. The protein functions primarily as a negative regulator of various signaling pathways, including innate immune responses and autophagy. In hematopoietic stem cells, TRIM47 prevents stress-induced exhaustion by mediating K48-linked ubiquitination and degradation of MAVS, thereby inhibiting excessive innate immune activation 1. In liver pathology, TRIM47 promotes nonalcoholic steatohepatitis (NASH) progression by degrading the protective deubiquitinase CYLD, which normally suppresses TAK1-mediated JNK-p38 signaling 2. TRIM47 also regulates hepatocellular carcinoma progression by ubiquitinating CDO1, affecting ferroptotic cell death pathways 3. In cerebrovascular disease, TRIM47 serves as an autophagy inhibitor in brain endothelial cells, with genome-wide association studies identifying it as a genetic risk factor for white matter hyperintensities 45. Loss of TRIM47 function increases endothelial permeability, a hallmark of cerebral small vessel disease 4. The protein is particularly enriched in brain endothelial cells and shows tissue-specific expression patterns that correlate with its diverse physiological roles 45.

Sources cited
1
TRIM47 prevents hematopoietic stem cell exhaustion by mediating K48-linked ubiquitination and degradation of MAVS
PMID: 39117713
2
TRIM47 interacts with and degrades CYLD, promoting NASH progression through TAK1-JNK-p38 signaling
PMID: 29291351
3
TRIM47 promotes hepatocellular carcinoma by ubiquitinating CDO1 and modulating ferroptotic cell death
PMID: 38614226
4
TRIM47 is a genetic risk factor for cerebral small vessel disease and increases endothelial permeability
PMID: 35511193
5
TRIM47 functions as an autophagy inhibitor in brain endothelial cells and is highly expressed in cerebral vasculature
PMID: 39331575
Disease Associationsⓘ20
cerebral small vessel diseaseOpen Targets
0.27Weak
hypothyroidismOpen Targets
0.25Weak
psoriasisOpen Targets
0.23Weak
hypertensionOpen Targets
0.21Weak
response to statinOpen Targets
0.20Weak
HypercholesterolemiaOpen Targets
0.12Weak
neoplasmOpen Targets
0.11Weak
gliomaOpen Targets
0.10Suggestive
hepatocellular carcinomaOpen Targets
0.09Suggestive
hyperlipidemiaOpen Targets
0.08Suggestive
gastric cancerOpen Targets
0.08Suggestive
renal cell carcinomaOpen Targets
0.08Suggestive
ovarian cancerOpen Targets
0.08Suggestive
non-small cell lung carcinomaOpen Targets
0.08Suggestive
colorectal cancerOpen Targets
0.08Suggestive
triple-negative breast cancerOpen Targets
0.08Suggestive
head and neck squamous cell carcinomaOpen Targets
0.07Suggestive
intrahepatic cholangiocarcinomaOpen Targets
0.07Suggestive
laryngotracheoesophageal cleftOpen Targets
0.07Suggestive
osteosarcomaOpen Targets
0.07Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
CARMIL3Shared pathway33%ARHGAP33Shared pathway33%UBE3BShared pathway33%LZTS1Shared pathway25%DOCK4Shared pathway25%SYNDIG1Shared pathway25%
Tissue Expression6 tissues
Liver
100%
Lung
73%
Heart
67%
Brain
61%
Ovary
35%
Bone Marrow
9%
Gene Interaction Network
Click a node to explore
TRIM47CARMIL3ARHGAP33UBE3BLZTS1DOCK4SYNDIG1
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q96LD4
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.35LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF1.06 [0.83–1.35]
RankingsWhere TRIM47 stands among ~20K protein-coding genes
  • #8,747of 20,598
    Most Researched51
  • #14,126of 17,882
    Most Constrained (LOEUF)1.35
Genes detectedTRIM47
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Gene-mapping study of extremes of cerebral small vessel disease reveals TRIM47 as a strong candidate.
PMID: 35511193
Brain · 2022
1.00
2
Trim47 prevents hematopoietic stem cell exhaustion during stress by regulating MAVS-mediated innate immune pathway.
PMID: 39117713
Nat Commun · 2024
0.90
3
Efp/TRIM25 and Its Related Protein, TRIM47, in Hormone-Dependent Cancers.
PMID: 35954308
Cells · 2022
0.80
4
TRIM47-CDO1 axis dictates hepatocellular carcinoma progression by modulating ferroptotic cell death through the ubiquitin‒proteasome system.
PMID: 38614226
Free Radic Biol Med · 2024
0.70
5
The deubiquitinating enzyme cylindromatosis mitigates nonalcoholic steatohepatitis.
PMID: 29291351
Nat Med · 2018
0.60