HomeAboutRankingsData Sources
Β© 2026 GeneE
🧬
GeneE
2 sources retrieved Β· Most recent: April 2026 Β· Index updated 15 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
TRIM49C
tripartite motif containing 49C
Chromosome 11 Β· 11q14.3
NCBI Gene: 642612Ensembl: ENSG00000204449.3HGNC: HGNC:38877UniProt: P0CI26
8PubMed Papers
16Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
protein bindingubiquitin protein ligase activityregulation of gene expressioninnate immune responsegastric adenocarcinomahair colorTietze syndromealcohol drinking
✦AI Summary

Based on limited published evidence, TRIM49C is an E3 ubiquitin protein ligase with protein binding capacity localized to the cytoplasm. GO annotations indicate roles in innate immune response and gene expression regulation. TRIM49C mutations have been identified as significantly mutated genes in gastric cancer across multiple ancestries 1, and recurrent TRIM49C mutations generate neoantigens with potential immunotherapeutic applications in gastric cancer patients 2. Specific molecular mechanisms and functional details remain largely unexplored.

Sources cited
1
TRIM49C identified as a significantly mutated gene in multiancestry gastric cancer analysis
PMID: 36914835
2
TRIM49C mutations generate recurrent neoantigens with potential therapeutic value in gastric cancer immunotherapy
PMID: 31781598
⚠Limited data available β€” This gene has 2 indexed publications. Summary and analysis may be incomplete.
Disease Associationsβ“˜16
gastric adenocarcinomaOpen Targets
0.14Weak
hair colorOpen Targets
0.11Weak
Tietze syndromeOpen Targets
0.03Suggestive
alcohol drinkingOpen Targets
0.03Suggestive
pleural empyemaOpen Targets
0.02Suggestive
pneumothoraxOpen Targets
0.02Suggestive
retinopathyOpen Targets
0.02Suggestive
retinoschisisOpen Targets
0.02Suggestive
osteoarthritisOpen Targets
0.02Suggestive
urinary bladder carcinomaOpen Targets
0.00Suggestive
cancerOpen Targets
0.00Suggestive
acute myeloid leukemiaOpen Targets
0.00Suggestive
cervical cancerOpen Targets
0.00Suggestive
cholangiocarcinomaOpen Targets
0.00Suggestive
diffuse large B-cell lymphomaOpen Targets
0.00Suggestive
uterine corpus endometrial carcinomaOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar β†—
Related Genes
RFPL3Shared pathway100%RFPL2Shared pathway100%TRIM34Shared pathway100%TRIM51Shared pathway100%TRIM4Shared pathway100%TRIM64Shared pathway100%
Tissue Expression6 tissues
Brain
100%
Bone Marrow
0%
Heart
0%
Ovary
0%
Liver
0%
Lung
0%
Gene Interaction Network
Click a node to explore
TRIM49CRFPL3RFPL2TRIM34TRIM51TRIM4TRIM64
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt P0CI26
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
0.82LoF Tolerant
pLIβ“˜
0.65Intermediate
Observed/Expected LoF0.26 [0.10–0.82]
RankingsWhere TRIM49C stands among ~20K protein-coding genes
  • #17,740of 20,598
    Most Researched8
  • #6,947of 17,882
    Most Constrained (LOEUF)0.82
Genes detectedTRIM49C
Sources retrieved2 papers
Response timeβ€”
πŸ“„ Sources
2
1
Multiancestry genomic and transcriptomic analysis of gastric cancer.
PMID: 36914835
Nat Genet Β· 2023
1.00
2
A Comprehensive Survey of Genomic Alterations in Gastric Cancer Reveals Recurrent Neoantigens as Potential Therapeutic Targets.
PMID: 31781598
Biomed Res Int Β· 2019
0.50