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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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UBD
ubiquitin like modifier D
Chromosome 6 · 6p22.1
NCBI Gene: 10537Ensembl: ENSG00000206468.3HGNC: HGNC:18795UniProt: A0A1U9X8S6
135PubMed Papers
0Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingproteasome bindingpositive regulation of canonical NF-kappaB signal transductionaggresome assembly
✦AI Summary

UBD (ubiquitin-like modifier D) is a ubiquitin-like protein that functions as a post-translational modifier targeting proteins for proteasomal degradation in an NUB1-dependent manner 123. UBA6 activates UBD conjugation to target proteins via adenylation of its C-terminal glycine 45. UBD regulates innate immunity by promoting TNF-mediated proteasomal degradation of ubiquitinated IκB-α, enabling NF-κB activation 6. The protein participates in dendritic cell maturation and contributes to immune responses 7. UBD mediates mitotic non-disjunction and chromosome 6 by abbreviating mitotic phase and impairing MAD2L1 kinetochore localization 8. In renal disease contexts including polycystic kidney disease and HIV-associated nephropathy, UBD mediates caspase-dependent apoptosis in renal epithelial and tubular cells 9. Recently, UBD was identified as a genetic modifier of APOL1-associated kidney disease, where reduced UBD expression correlates with increased APOL1-mediated toxicity, suggesting UBD mitigates APOL1 pathogenicity through proteasomal targeting 10. Additionally, UBD was identified as a novel gene associated with depressive symptoms through exome-wide association analysis, linking it to immune and neuropsychiatric traits 11. UBD also mediates claudin-5 degradation in endothelial cells through the IKZF1-UBD axis, affecting blood-brain barrier integrity 12.

Sources cited
1
UBD regulates innate immunity by promoting TNF-mediated proteasomal degradation of ubiquitinated IκB-α, enabling NF-κB activation .
PMID: 19959714
2
The protein participates in dendritic cell maturation and contributes to immune responses .
PMID: 19028597
3
UBD mediates mitotic non-disjunction and chromosome 6 by abbreviating mitotic phase and impairing MAD2L1 kinetochore localization .
PMID: 16495226
4
In renal disease contexts including polycystic kidney disease and HIV-associated nephropathy, UBD mediates caspase-dependent apoptosis in renal epithelial and tubular cells .
PMID: 16495380
5
Recently, UBD was identified as a genetic modifier of APOL1-associated kidney disease, where reduced UBD expression correlates with increased APOL1-mediated toxicity, suggesting UBD mitigates APOL1 pathogenicity through proteasomal targeting .
PMID: 29531077
6
Additionally, UBD was identified as a novel gene associated with depressive symptoms through exome-wide association analysis, linking it to immune and neuropsychiatric traits .
PMID: 39472661
7
UBD also mediates claudin-5 degradation in endothelial cells through the IKZF1-UBD axis, affecting blood-brain barrier integrity .
PMID: 41297453
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
PSMB8Protein interaction100%PSMB4Protein interaction100%PSMB10Protein interaction100%RPS28Protein interaction100%UBE2ZProtein interaction100%RPS27AProtein interaction98%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
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UBDPSMB8PSMB4PSMB10RPS28UBE2ZRPS27A
PROTEIN STRUCTURE
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PDB6GF1 · 1.93 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.48LoF Tolerant
pLIⓘ
0.36Tolerant
Observed/Expected LoF0.34 [0.12–1.48]
RankingsWhere UBD stands among ~20K protein-coding genes
  • #3,443of 20,598
    Most Researched135 · top quartile
  • #15,033of 17,882
    Most Constrained (LOEUF)1.48
Genes detectedUBD
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Multifaceted roles of TAX1BP1 in autophagy.
PMID: 35470757
Autophagy · 2023
1.00
2
Emerging views of OPTN (optineurin) function in the autophagic process associated with disease.
PMID: 33783320
Autophagy · 2022
0.90
3
Oral health problems among palliative and terminally ill patients: an integrated systematic review.
PMID: 32188452
BMC Oral Health · 2020
0.80
4
Identifying disease progression biomarkers in metabolic associated steatotic liver disease (MASLD) through weighted gene co-expression network analysis and machine learning.
PMID: 40275274
J Transl Med · 2025
0.70
5
Endothelial cells sense temozolomide resistance to facilitate monocyte-derived macrophage infiltration in glioblastoma.
PMID: 41297453
Drug Resist Updat · 2026
0.60