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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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VAT1
vesicle amine transport 1
Chromosome 17 · 17q21.31
NCBI Gene: 10493Ensembl: ENSG00000108828.17HGNC: HGNC:16919UniProt: Q99536
112PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
cytoplasmnegative regulation of mitochondrial fusionintermembrane phospholipid transfercytosolcoronary artery diseaseneoplasmskin diseaseHammer Toe Syndrome
✦AI Summary

VAT1 (vesicle amine transport 1) is a multifunctional protein with enzymatic and transport activities that plays diverse roles in cellular processes and disease pathogenesis. The protein functions as a probable NADPH-dependent quinone oxidoreductase with unclear physiological substrates 1. Additionally, VAT1 mediates the transfer of negatively charged phospholipids including phosphatidic acid, phosphatidylserine, and phosphatidylglycerol between endoplasmic reticulum and mitochondrial membranes 23. The protein may regulate mitochondrial fusion through interactions with mitofusins 4. VAT1 has emerged as a significant biomarker in cancer biology, with high expression associated with poor prognosis in gastric cancer 5, hepatocellular carcinoma 6, and gliomas 7. In gastric cancer, VAT1 promotes cell proliferation, inhibits apoptosis, and regulates MAPK signaling and epithelial-mesenchymal transition 5. The protein contributes to immunosuppression in gliomas by negatively correlating with immune cell infiltration 7. VAT1 also functions as a catechin-binding protein, specifically interacting with epigallocatechin-3-gallate (EGCg) and potentially mediating some of its cellular effects 8. These diverse functions position VAT1 as both a potential therapeutic target and diagnostic biomarker in multiple diseases.

Sources cited
1
VAT1 functions as a probable NADPH-dependent quinone oxidoreductase with unclear physiological substrates
PMID: 33483563
2
VAT1 mediates transfer of negatively charged phospholipids between ER and mitochondrial membranes
PMID: 26394711
3
VAT1 mediates transfer of phosphatidic acid, phosphatidylserine, and phosphatidylglycerol between membranes
PMID: 32005660
4
VAT1 may regulate mitochondrial fusion through interactions with mitofusins
PMID: 17105775
5
VAT1 is highly expressed in gastric cancer, promotes proliferation, inhibits apoptosis, and regulates MAPK/EMT pathways
PMID: 39832459
6
High VAT1 expression correlates with poor prognosis in hepatocellular carcinoma
PMID: 33440991
7
VAT1 contributes to immunosuppression in gliomas and negatively correlates with immune cell infiltration
PMID: 33576871
8
VAT1 functions as a catechin-binding protein that directly interacts with EGCg
PMID: 38403661
Disease Associationsⓘ20
coronary artery diseaseOpen Targets
0.10Suggestive
neoplasmOpen Targets
0.08Suggestive
skin diseaseOpen Targets
0.06Suggestive
Hammer Toe SyndromeOpen Targets
0.05Suggestive
gliomaOpen Targets
0.04Suggestive
hepatocellular carcinomaOpen Targets
0.04Suggestive
osteoarthritisOpen Targets
0.03Suggestive
strokeOpen Targets
0.03Suggestive
glioblastomaOpen Targets
0.02Suggestive
oral squamous cell carcinomaOpen Targets
0.02Suggestive
menopauseOpen Targets
0.02Suggestive
cancerOpen Targets
0.02Suggestive
meningiomaOpen Targets
0.02Suggestive
gastric cancerOpen Targets
0.02Suggestive
infectionOpen Targets
0.02Suggestive
benign prostatic hyperplasiaOpen Targets
0.01Suggestive
glioblastoma multiformeOpen Targets
0.01Suggestive
retinoblastomaOpen Targets
0.01Suggestive
Alzheimer diseaseOpen Targets
0.01Suggestive
cervical squamous intraepithelial neoplasiaOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
OSBPL6Shared pathway25%ADCK1Shared pathway25%STARD7Shared pathway20%OSBPL5Shared pathway14%OSBPL8Shared pathway11%NME4Shared pathway10%
Tissue Expression6 tissues
Brain
100%
Ovary
99%
Bone Marrow
80%
Lung
70%
Heart
56%
Liver
26%
Gene Interaction Network
Click a node to explore
VAT1OSBPL6ADCK1STARD7OSBPL5OSBPL8NME4
PROTEIN STRUCTURE
Preparing viewer…
PDB6K9Y · 2.20 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.02LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.73 [0.52–1.02]
RankingsWhere VAT1 stands among ~20K protein-coding genes
  • #4,256of 20,598
    Most Researched112 · top quartile
  • #10,003of 17,882
    Most Constrained (LOEUF)1.02
Genes detectedVAT1
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Identification and validation VAT1 in gastric cancer through bioinformatics and experimental analysis.
PMID: 39832459
Int Immunopharmacol · 2025
1.00
2
Identification and Characterization of Synaptic Vesicle Membrane Protein VAT-1 Homolog as a New Catechin-Binding Protein.
PMID: 38403661
Biol Pharm Bull · 2024
0.90
3
Expression of VAT1 in hepatocellular carcinoma and its clinical significance.
PMID: 33440991
Neoplasma · 2021
0.80
4
Transcriptome-wide association study identifies novel candidate susceptibility genes for migraine.
PMID: 37415806
HGG Adv · 2023
0.70
5
Proteome-Wide and Immune Cell Phenotype Mendelian Randomization Highlights Immune Involvement in Genetic Generalized Epilepsy.
PMID: 40495522
Brain Behav · 2025
0.60