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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 15 days ago
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WARS2
tryptophanyl tRNA synthetase 2, mitochondrial
Chromosome 1 Β· 1p12
NCBI Gene: 10352Ensembl: ENSG00000116874.13HGNC: HGNC:12730UniProt: B7Z448
45PubMed Papers
22Diseases
0Drugs
15Pathogenic Variants
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
tryptophan-tRNA ligase activitymitochondrionmitochondrial matrixmitochondrial tryptophanyl-tRNA aminoacylationneurodevelopmental disorder, mitochondrial, with abnormal movements and lactic acidosis, with or without seizuresparkinsonism-dystonia 3, childhood-onsetneurodegenerative diseasegenetic disorder
✦AI Summary

WARS2 encodes mitochondrial tryptophanyl-tRNA synthetase, which catalyzes the two-step aminoacylation of tryptophan to tRNA(Trp) for mitochondrial protein synthesis 1. Beyond its canonical role in translation, WARS2 functions as a determinant of angiogenesis, with reduced enzyme activity impairing endothelial cell angiogenesis and cardiac capillary density 2. The gene regulates brown adipose tissue (BAT) function and glucose metabolism; wild-type WARS2 increases mitochondrial respiration and glucose oxidation in BAT while reducing visceral adiposity 3. WARS2 variants associate with cardiovascular and metabolic disease susceptibility, appearing in genome-wide association studies as a regulator of visceral adiposity 4. Biallelic WARS2 mutations cause neurodevelopmental mitochondrial disorders with diverse phenotypes, ranging from neonatal-onset disease to dopa-responsive early-onset parkinsonism and progressive myoclonus-ataxia 56. Disease variants impair mitochondrial integrity and reduce full-length protein expression 5. A common hypomorphic missense variant (p.Trp13Gly) occurs in ~0.5% of Europeans and frequently appears in compound heterozygotes with truncating alleles 6. Beyond inherited disease, an intronic long noncoding RNA (WARS2-IT1) derived from the WARS2 locus influences colorectal cancer radioresistance through HIF-1Ξ± stabilization 7.

Sources cited
1
WARS2 catalyzes aminoacylation of tryptophan to tRNA(Trp) for mitochondrial protein synthesis
PMID: 39230874
2
WARS2 determines angiogenesis; reduced enzyme activity impairs endothelial angiogenesis and cardiac capillary density
PMID: 27389904
3
WARS2 regulates brown adipose tissue function, mitochondrial respiration, glucose oxidation, and visceral adiposity
PMID: 29261326
4
WARS2 identified in GWAS as regulator of visceral adiposity associated with cardiovascular disease
PMID: 38477908
5
Biallelic WARS2 mutations cause dopa-responsive early-onset parkinsonism and progressive myoclonus-ataxia with decreased full-length protein expression
PMID: 34890876
6
WARS2 variants cause neurodevelopmental disorder with tremor-parkinsonism; recurrent p.Trp13Gly variant occurs in ~0.5% of general European population
PMID: 37107582
7
WARS2-IT1 intronic lncRNA enhances colorectal cancer radioresistance via HIF-1Ξ± stabilization
PMID: 41213902
Disease Associationsβ“˜22
neurodevelopmental disorder, mitochondrial, with abnormal movements and lactic acidosis, with or without seizuresOpen Targets
0.81Strong
parkinsonism-dystonia 3, childhood-onsetOpen Targets
0.71Strong
neurodegenerative diseaseOpen Targets
0.56Moderate
genetic disorderOpen Targets
0.47Moderate
androgenetic alopeciaOpen Targets
0.43Moderate
mitochondrial diseaseOpen Targets
0.40Moderate
Infantile dystonia-parkinsonismOpen Targets
0.37Weak
parkinsonism-dystonia, infantileOpen Targets
0.37Weak
colorectal cancerOpen Targets
0.34Weak
alopeciaOpen Targets
0.33Weak
sialolithiasisOpen Targets
0.31Weak
facial painOpen Targets
0.27Weak
Neurodevelopmental disorderOpen Targets
0.27Weak
smoking behaviorOpen Targets
0.26Weak
AscitesOpen Targets
0.25Weak
ptosisOpen Targets
0.13Weak
spinal stenosisOpen Targets
0.11Weak
neoplasmOpen Targets
0.08Suggestive
colorectal carcinomaOpen Targets
0.08Suggestive
oral squamous cell carcinomaOpen Targets
0.07Suggestive
Neurodevelopmental disorder, mitochondrial, with abnormal movements and lactic acidosis, with or without seizuresUniProt
Parkinsonism-dystonia 3, childhood-onsetUniProt
Pathogenic Variants15
NM_015836.4(WARS2):c.938A>T (p.Lys313Met)Pathogenic
Neurodevelopmental disorder, mitochondrial, with abnormal movements and lactic acidosis, with or without seizures|Inborn genetic diseases|not provided|WARS2-related disorder
β˜…β˜…β˜†β˜†2025β†’ Residue 313
NM_015836.4(WARS2):c.833T>G (p.Val278Gly)Likely pathogenic
Neurodevelopmental disorder, mitochondrial, with abnormal movements and lactic acidosis, with or without seizures|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 278
NM_015836.4(WARS2):c.715C>T (p.Arg239Ter)Likely pathogenic
not provided|WARS2-related disorder|Neurodevelopmental disorder, mitochondrial, with abnormal movements and lactic acidosis, with or without seizures
β˜…β˜…β˜†β˜†2025β†’ Residue 239
NM_015836.4(WARS2):c.348+1G>TPathogenic
WARS2-related disorder
β˜…β˜†β˜†β˜†2024
NM_015836.4(WARS2):c.116C>G (p.Ser39Cys)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2023β†’ Residue 39
NM_015836.4(WARS2):c.313_317delinsG (p.Asn105fs)Pathogenic
Inborn genetic diseases
β˜…β˜†β˜†β˜†2022β†’ Residue 105
NM_015836.4(WARS2):c.368T>G (p.Leu123Ter)Likely pathogenic
Parkinsonism-dystonia 3, childhood-onset
β˜…β˜†β˜†β˜†2022β†’ Residue 123
NM_015836.4(WARS2):c.680T>C (p.Met227Thr)Likely pathogenic
Neurodevelopmental disorder, mitochondrial, with abnormal movements and lactic acidosis, with or without seizures
β˜…β˜†β˜†β˜†2022β†’ Residue 227
NM_015836.4(WARS2):c.526G>T (p.Val176Phe)Likely pathogenic
Neurodevelopmental disorder, mitochondrial, with abnormal movements and lactic acidosis, with or without seizures
β˜…β˜†β˜†β˜†2022β†’ Residue 176
NM_015836.4(WARS2):c.148G>T (p.Gly50Cys)Likely pathogenic
Parkinsonism-dystonia 3, childhood-onset
β˜…β˜†β˜†β˜†2021β†’ Residue 50
NM_015836.4(WARS2):c.91-8725_349-3571delPathogenic
Neurodevelopmental disorder, mitochondrial, with abnormal movements and lactic acidosis, with or without seizures
β˜…β˜†β˜†β˜†2020
NM_015836.4(WARS2):c.622G>T (p.Glu208Ter)Pathogenic
Neurodevelopmental disorder, mitochondrial, with abnormal movements and lactic acidosis, with or without seizures|Parkinsonism-dystonia 3, childhood-onset
β˜…β˜†β˜†β˜†2020β†’ Residue 208
NM_015836.4(WARS2):c.532G>C (p.Val178Leu)Pathogenic
Neurodevelopmental disorder, mitochondrial, with abnormal movements and lactic acidosis, with or without seizures
β˜…β˜†β˜†β˜†2019β†’ Residue 178
NM_015836.4(WARS2):c.149G>A (p.Gly50Asp)Likely pathogenic
Neurodevelopmental disorder, mitochondrial, with abnormal movements and lactic acidosis, with or without seizures|Parkinsonism-dystonia 3, childhood-onset
β˜…β˜†β˜†β˜†2018β†’ Residue 50
NM_015836.4(WARS2):c.134G>T (p.Gly45Val)Pathogenic
Neurodevelopmental disorder, mitochondrial, with abnormal movements and lactic acidosis, with or without seizures
β˜†β˜†β˜†β˜†2017β†’ Residue 45
View on ClinVar β†—
Related Genes
LARS1Protein interaction100%EPRS1Protein interaction100%LARS2Protein interaction98%IARS2Protein interaction98%RARS2Protein interaction92%YARS2Protein interaction85%
Tissue Expression6 tissues
Heart
100%
Ovary
69%
Lung
57%
Liver
53%
Brain
51%
Bone Marrow
23%
Gene Interaction Network
Click a node to explore
WARS2LARS1EPRS1LARS2IARS2RARS2YARS2
PROTEIN STRUCTURE
Preparing viewer…
PDB5EKD Β· 1.82 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
1.10LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.80 [0.59–1.10]
RankingsWhere WARS2 stands among ~20K protein-coding genes
  • #9,547of 20,598
    Most Researched45
  • #2,468of 5,498
    Most Pathogenic Variants15
  • #11,195of 17,882
    Most Constrained (LOEUF)1.10
Genes detectedWARS2
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Cardiovascular Significance and Genetics of Epicardial and Pericardial Adiposity.
PMID: 38477908
JAMA Cardiol Β· 2024
1.00
2
Mutant Wars2 gene in spontaneously hypertensive rats impairs brown adipose tissue function and predisposes to visceral obesity.
PMID: 29261326
Physiol Res Β· 2017
0.90
3
The Expanding Phenotypical Spectrum of
PMID: 37107582
Genes (Basel) Β· 2023
0.80
4
Investigation in yeast of novel variants in mitochondrial aminoacyl-tRNA synthetases WARS2, NARS2, and RARS2 genes associated with mitochondrial diseases.
PMID: 39230874
Hum Mol Genet Β· 2024
0.70
5
Wars2 is a determinant of angiogenesis.
PMID: 27389904
Nat Commun Β· 2016
0.60