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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 15 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
WASF1
WASP family member 1
Chromosome 6 Β· 6q21
NCBI Gene: 8936Ensembl: ENSG00000112290.14HGNC: HGNC:12732UniProt: Q92558
120PubMed Papers
21Diseases
0Drugs
13Pathogenic Variants
FUNCTIONAL ROLE
Highly ConstrainedHub Gene
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
mitochondrion organizationSCAR complexprotein-containing complexRac protein signal transductionneurodevelopmental disorder with absent language and variable seizuresIntellectual disabilitygenetic disordercomplex neurodevelopmental disorder
✦AI Summary

WASF1 (WASP family member 1) is a key effector protein that mediates signal transduction from receptor tyrosine kinases and small GTPases to the actin cytoskeleton 1. As a core component of the WAVE regulatory complex (WRC), WASF1 promotes actin filament polymerization and lamellipodia formation through cooperation with the Arp2/3 complex 2. Beyond cytoskeletal regulation, WASF1 participates in BDNF-NTRK2 endocytic trafficking and mitochondrial dynamics 1. Pathogenic WASF1 variants cause neurodevelopmental disorder with absent language and variable seizures (NEDALVS), an autosomal dominant condition characterized by severe developmental delay, intellectual disability, seizures, hypotonia, and microcephaly 34. Both truncating variants and missense mutations, particularly hotspot mutations at p.Trp161, have been identified 3. NEDALVS represents the primary clinical association with WASF1 dysfunction 56, though WASF1 loss-of-function has been noted in prostate cancer contexts 7. Clinically, WASF1-related NDD presents a spectrum from moderate-to-profound intellectual disability with autism and epilepsy, to milder phenotypes 6. Motor and language developmental delays occur universally, with seizures in ~65% of cases 4. Exome sequencing enables molecular diagnosis in resource-limited settings 5, making genetic confirmation essential for NEDALVS diagnosis and family counseling.

Sources cited
1
WASF1 is part of WAVE complex regulating lamellipodia formation and actin filament reorganization; involved in BDNF-NTRK2 endocytic trafficking and mitochondrial dynamics
PMID: 29961568
2
WASF1 forms hetero-pentameric WASF regulatory complex (WRC) that cooperatively regulates actin nucleation and lamellipodia formation
PMID: 35691539
3
De novo WASF1 missense variants, particularly at p.Trp161 hotspot, cause NEDALVS with infantile spasms, developmental delay, microcephaly, and seizures
PMID: 34478686
4
WASF1 variants cause NEDALVS with core features of motor/language developmental delay (100%), intellectual disability (100%), epilepsy (64.7%), autistic behavior (76.5%), and hypotonia (70.6%)
PMID: 41451491
5
WASF1 identified as pathogenic gene in de novo variants causing syndromic intellectual disability in neurodevelopmental cohort
PMID: 38114583
6
De novo WASF1 variants including truncating mutations and missense variants cause autosomal dominant NDD with broader phenotypic spectrum including mildly affected individuals
PMID: 34356165
7
WASF1 identified as tumor suppressor candidate with loss-of-function variants in prostate cancer germline analysis
PMID: 40064858
Disease Associationsβ“˜21
neurodevelopmental disorder with absent language and variable seizuresOpen Targets
0.71Strong
Intellectual disabilityOpen Targets
0.56Moderate
genetic disorderOpen Targets
0.41Moderate
complex neurodevelopmental disorderOpen Targets
0.37Weak
Epileptic encephalopathyOpen Targets
0.33Weak
neurodegenerative diseaseOpen Targets
0.20Weak
Oral leukoplakiaOpen Targets
0.12Weak
hereditary ataxiaOpen Targets
0.12Weak
bile duct disorderOpen Targets
0.09Suggestive
respiratory tract infectious disorderOpen Targets
0.06Suggestive
esophageal ulcerOpen Targets
0.05Suggestive
response to xenobiotic stimulusOpen Targets
0.05Suggestive
acute lymphoblastic leukemiaOpen Targets
0.04Suggestive
infectionOpen Targets
0.04Suggestive
cancerOpen Targets
0.03Suggestive
autosomal recessive primary microcephalyOpen Targets
0.03Suggestive
autosomal recessive spastic paraplegia type 67Open Targets
0.03Suggestive
lissencephaly 4Open Targets
0.03Suggestive
X-linked parkinsonism-spasticity syndromeOpen Targets
0.03Suggestive
NDE1-related microhydranencephalyOpen Targets
0.03Suggestive
Neurodevelopmental disorder with absent language and variable seizuresUniProt
Pathogenic Variants13
NM_003931.3(WASF1):c.1516C>T (p.Arg506Ter)Pathogenic
Intellectual disability|Neurodevelopmental disorder with absent language and variable seizures|not provided|Inborn genetic diseases
β˜…β˜…β˜†β˜†2025β†’ Residue 506
NM_003931.3(WASF1):c.1422del (p.Pro475fs)Likely pathogenic
Neurodevelopmental disorder with absent language and variable seizures
β˜…β˜†β˜†β˜†2026β†’ Residue 475
NM_003931.3(WASF1):c.902C>G (p.Thr301Arg)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 301
NM_003931.3(WASF1):c.481T>C (p.Trp161Arg)Pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 161
NM_003931.3(WASF1):c.1429del (p.Gln477fs)Pathogenic
Neurodevelopmental disorder with absent language and variable seizures
β˜…β˜†β˜†β˜†2025β†’ Residue 477
NM_003931.3(WASF1):c.262G>T (p.Glu88Ter)Pathogenic
Neurodevelopmental disorder with absent language and variable seizures
β˜…β˜†β˜†β˜†2023β†’ Residue 88
NM_003931.3(WASF1):c.1473del (p.Pro492fs)Pathogenic
Neurodevelopmental disorder with absent language and variable seizures
β˜…β˜†β˜†β˜†2023β†’ Residue 492
NM_003931.3(WASF1):c.493dup (p.Met165fs)Pathogenic
Neurodevelopmental disorder with absent language and variable seizures
β˜…β˜†β˜†β˜†2023β†’ Residue 165
NM_003931.3(WASF1):c.1319C>T (p.Ser440Leu)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2023β†’ Residue 440
NM_003931.3(WASF1):c.1466C>G (p.Ser489Ter)Likely pathogenic
Neurodevelopmental disorder with absent language and variable seizures
β˜…β˜†β˜†β˜†2021β†’ Residue 489
NM_003931.3(WASF1):c.136A>T (p.Lys46Ter)Likely pathogenic
Intellectual disability
β˜…β˜†β˜†β˜†2019β†’ Residue 46
NM_003931.3(WASF1):c.1482delinsGCCAGG (p.Ile494fs)Pathogenic
Intellectual disability|Neurodevelopmental disorder with absent language and variable seizures
β˜†β˜†β˜†β˜†2019β†’ Residue 494
NM_003931.3(WASF1):c.1558C>T (p.Gln520Ter)Pathogenic
Intellectual disability|Epileptic encephalopathy|Neurodevelopmental disorder with absent language and variable seizures
β˜†β˜†β˜†β˜†2019β†’ Residue 520
View on ClinVar β†—
Related Genes

No related genes found for this gene.

Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network

No interaction data available for this gene.

PROTEIN STRUCTURE
Preparing viewer…
PDB3P8C Β· 2.29 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.30Highly Constrained
pLIβ“˜
1.00Intolerant
Observed/Expected LoF0.16 [0.09–0.30]
RankingsWhere WASF1 stands among ~20K protein-coding genes
  • #3,950of 20,598
    Most Researched120 Β· top quartile
  • #2,584of 5,498
    Most Pathogenic Variants13
  • #1,156of 17,882
    Most Constrained (LOEUF)0.30 Β· top 10%
Genes detectedWASF1
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Multi-omics analyses reveal that hesperidin ameliorates high-altitude pulmonary hypertension by restoring gut-lung axis homeostasis.
PMID: 40680331
Phytomedicine Β· 2025
1.00
2
De novo variants underlying monogenic syndromes with intellectual disability in a neurodevelopmental cohort from India.
PMID: 38114583
Eur J Hum Genet Β· 2024
0.90
3
Trio exome sequencing identified a novel de novo WASF1 missense variant leading to recurrent site substitution in a Chinese patient with developmental delay, microcephaly, and early-onset seizures: A mutational hotspot p.Trp161 and literature review.
PMID: 34478686
Clin Chim Acta Β· 2021
0.80
4
[Report of a Chinese pedigree affected with Neurodevelopmental disorder with absent language and variable seizures due to variant of WASF1 gene and a literature review].
PMID: 41451491
Zhonghua Yi Xue Yi Chuan Xue Za Zhi Β· 2025
0.70
5
The recurrent WASF1 nonsense variant identified in two unaffected Chinese families with neurodevelopmental disorder: case report and review of the literatures.
PMID: 37641121
BMC Med Genomics Β· 2023
0.60