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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
AP1S1
adaptor related protein complex 1 subunit sigma 1
Chromosome 7 Β· 7q22.1
NCBI Gene: 1174Ensembl: ENSG00000106367.16HGNC: HGNC:559UniProt: P61966
85PubMed Papers
21Diseases
0Drugs
9Pathogenic Variants
FUNCTIONAL ROLE
Transporter
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
response to virusGolgi apparatusmembranevesicle-mediated transportMEDNIK syndromeHIV infectionneurodegenerative diseasegenetic disorder
✦AI Summary

AP1S1 encodes the sigma 1A subunit of adaptor protein complex 1 (AP-1), which plays a critical role in intracellular protein trafficking and vesicle formation 1. The AP-1 complex mediates clathrin-coated vesicle assembly and protein cargo sorting between the trans-Golgi network, endosomes, and plasma membrane, particularly directing trafficking of copper pumps ATP7A and ATP7B 1. Mutations in AP1S1 cause MEDNIK syndrome, a rare autosomal recessive disorder characterized by mental retardation, enteropathy, deafness, neuropathy, ichthyosis, and keratodermia 23. Both truncating mutations and missense variants result in complete MEDNIK syndrome, with missense variants causing loss-of-function through impaired AP-1 complex assembly and defective sorting motif binding 3. In intestinal epithelial cells, AP1S1 deficiency causes barrier dysfunction with altered tight junction protein localization, decreased transepithelial resistance, and increased permeability 4. Beyond MEDNIK syndrome, AP1S1 dysfunction contributes to Alzheimer's disease pathogenesis through increased neuronal vulnerability to oxidative stress and amyloid-Ξ² toxicity 5, and regulates EGFR trafficking in cancer cells, with downregulation leading to lysosomal EGFR degradation 6. These findings establish AP1S1 as essential for cellular trafficking machinery and highlight its role in multiple disease contexts.

Sources cited
1
AP1S1 encodes sigma 1A subunit of AP-1 complex and directs trafficking of copper pumps ATP7A and ATP7B
PMID: 24754424
2
Mutations in AP1S1 cause MEDNIK syndrome with characteristic clinical features
PMID: 30244301
3
Both truncating and missense AP1S1 variants cause complete MEDNIK syndrome through loss-of-function mechanisms
PMID: 39269494
4
AP1S1 deficiency causes intestinal epithelial barrier defects with altered tight junction proteins
PMID: 32306098
5
AP1S1 reduction increases neuronal vulnerability to oxidative stress and amyloid-Ξ² in Alzheimer's disease
PMID: 40954504
6
AP1S1 regulates EGFR trafficking and its downregulation leads to lysosomal EGFR degradation in cancer cells
PMID: 37659097
Disease Associationsβ“˜21
MEDNIK syndromeOpen Targets
0.77Strong
HIV infectionOpen Targets
0.50Moderate
neurodegenerative diseaseOpen Targets
0.34Weak
genetic disorderOpen Targets
0.33Weak
Abnormality of the skeletal systemOpen Targets
0.19Weak
smoking initiationOpen Targets
0.12Weak
substance abuseOpen Targets
0.12Weak
attention deficit hyperactivity disorderOpen Targets
0.11Weak
obesityOpen Targets
0.11Weak
cholelithiasisOpen Targets
0.08Suggestive
viral meningitisOpen Targets
0.08Suggestive
Alzheimer diseaseOpen Targets
0.08Suggestive
breast cancerOpen Targets
0.07Suggestive
esophageal squamous cell carcinomaOpen Targets
0.07Suggestive
diabetes mellitusOpen Targets
0.05Suggestive
neoplasmOpen Targets
0.03Suggestive
alcohol drinkingOpen Targets
0.03Suggestive
lung cancerOpen Targets
0.03Suggestive
cancerOpen Targets
0.02Suggestive
glioblastoma multiformeOpen Targets
0.02Suggestive
MEDNIK syndromeUniProt
Pathogenic Variants9
NM_001283.5(AP1S1):c.364del (p.Asp122fs)Likely pathogenic
MEDNIK syndrome|not provided
β˜…β˜…β˜†β˜†2026β†’ Residue 122
NM_001283.5(AP1S1):c.291+2T>APathogenic
not provided|Inborn genetic diseases|MEDNIK syndrome
β˜…β˜…β˜†β˜†2026
NM_001283.5(AP1S1):c.186T>G (p.Tyr62Ter)Pathogenic
not provided|MEDNIK syndrome
β˜…β˜…β˜†β˜†2025β†’ Residue 62
NM_001283.5(AP1S1):c.183-2A>GPathogenic
MEDNIK syndrome|not provided|AP1S1-related disorder
β˜…β˜…β˜†β˜†2025
NM_001283.5(AP1S1):c.364dup (p.Asp122fs)Likely pathogenic
not provided|MEDNIK syndrome
β˜…β˜…β˜†β˜†2025β†’ Residue 122
NM_001283.5(AP1S1):c.183-1G>CPathogenic
not provided|MEDNIK syndrome
β˜…β˜…β˜†β˜†2025
NM_001283.5(AP1S1):c.220C>T (p.Gln74Ter)Pathogenic
MEDNIK syndrome|not provided
β˜…β˜…β˜†β˜†2023β†’ Residue 74
NM_001283.5(AP1S1):c.261C>G (p.Tyr87Ter)Pathogenic
not provided
β˜…β˜†β˜†β˜†2023β†’ Residue 87
NM_001283.5(AP1S1):c.60C>G (p.Tyr20Ter)Pathogenic
not provided
β˜…β˜†β˜†β˜†2023β†’ Residue 20
View on ClinVar β†—
Related Genes
AP4B1Protein interaction100%AP4M1Protein interaction100%AP5Z1Protein interaction97%AP5M1Protein interaction95%AP5S1Protein interaction94%CLTCProtein interaction93%
Tissue Expression6 tissues
Brain
100%
Liver
70%
Ovary
30%
Lung
28%
Bone Marrow
25%
Heart
21%
Gene Interaction Network
Click a node to explore
AP1S1AP4B1AP4M1AP5Z1AP5M1AP5S1CLTC
PROTEIN STRUCTURE
Preparing viewer…
PDB4P6Z Β· 3.00 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
1.08LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.68 [0.44–1.08]
RankingsWhere AP1S1 stands among ~20K protein-coding genes
  • #5,590of 20,598
    Most Researched85
  • #2,950of 5,498
    Most Pathogenic Variants9
  • #10,929of 17,882
    Most Constrained (LOEUF)1.08
Genes detectedAP1S1
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
MEDNIK syndrome with a frame shift causing mutation in AP1S1 gene and literature review of the clinical features.
PMID: 30244301
Metab Brain Dis Β· 2018
1.00
2
Ap1s1 reduction in the aging brain heightens neuronal vulnerability to amyloid-Ξ² and oxidative stress in Alzheimer's pathogenesis.
PMID: 40954504
Alzheimers Res Ther Β· 2025
0.90
3
Revising pathogenesis of AP1S1-related MEDNIK syndrome: a missense variant in the AP1S1 gene as a causal genetic lesion.
PMID: 39269494
J Mol Med (Berl) Β· 2024
0.80
4
Downregulation of AP1S1 causes the lysosomal degradation of EGFR in non-small cell lung cancer.
PMID: 37659097
J Cell Physiol Β· 2023
0.70
5
AP1S1 missense mutations cause a congenital enteropathy via an epithelial barrier defect.
PMID: 32306098
Hum Genet Β· 2020
0.60