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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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ARHGAP12
Rho GTPase activating protein 12
Chromosome 10 · 10p11.22
NCBI Gene: 94134Ensembl: ENSG00000165322.18HGNC: HGNC:16348UniProt: Q1RLN5
47PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
morphogenesis of an epithelial sheetnegative regulation of small GTPase mediated signal transductionphagocytosis, engulfmentactin filament organizationAbnormality of the skeletal systemuterine fibroidtype 1 diabetes mellitusovarian dysfunction
✦AI Summary

ARHGAP12 (Rho GTPase activating protein 12) functions as a negative regulator of Rho family GTPases, particularly Rac and Cdc42, by catalyzing their conversion from active GTP-bound to inactive GDP-bound states 12. The protein contains multiple functional domains including rhoGAP, SH3, PH, and two WW domains, and is ubiquitously expressed across human tissues 1. ARHGAP12 plays critical roles in cytoskeletal regulation and cellular morphology. At epithelial tight junctions, it suppresses N-WASP-mediated F-actin assembly through its WW domains, thereby controlling paracellular permeability of the leak pathway without affecting ion transport 3. In neuronal synapses, ARHGAP12 functions as a developmental brake, negatively regulating spine size and promoting AMPA receptor endocytosis, preventing precocious synapse maturation 4. The protein's GAP activity is modulated by G-actin binding, creating a negative feedback loop that couples Rac activity to actin dynamics 2. Disease relevance includes roles in cancer progression, where ARHGAP12 suppresses metastatic behaviors like invadopodia formation 2 and regulates morphological transitions in glioma 5. Additionally, ARHGAP12 serves as an independent prognostic factor in pancreatic adenocarcinoma 6 and contributes to intestinal protection during ischemia/reperfusion injury 7.

Sources cited
1
ARHGAP12 contains rhoGAP, SH3, PH and WW domains and is ubiquitously expressed
PMID: 11854031
2
ARHGAP12 is a GAP for Rac/Cdc42 GTPases and its activity is inhibited by G-actin binding
PMID: 31209295
3
ARHGAP12 suppresses F-actin assembly at tight junctions to control paracellular leak pathway
PMID: 40198220
4
ARHGAP12 functions as a developmental brake on excitatory synapses by regulating spine size and AMPA receptor endocytosis
PMID: 26854232
5
ARHGAP12 suppresses metastatic behaviors including invadopodia formation in melanoma cells
PMID: 31209295
6
ARHGAP12 regulates morphological transitions in glioma cells
PMID: 40053455
7
ARHGAP12 serves as an independent prognostic factor in pancreatic adenocarcinoma
PMID: 38783033
8
ARHGAP12 contributes to protection against intestinal ischemia/reperfusion injury
PMID: 39643171
Disease Associationsⓘ20
Abnormality of the skeletal systemOpen Targets
0.43Moderate
uterine fibroidOpen Targets
0.33Weak
type 1 diabetes mellitusOpen Targets
0.33Weak
ovarian dysfunctionOpen Targets
0.31Weak
Uterine leiomyomaOpen Targets
0.26Weak
sialolithiasisOpen Targets
0.25Weak
glaucomaOpen Targets
0.20Weak
cholelithiasisOpen Targets
0.16Weak
dislocationOpen Targets
0.16Weak
type 2 diabetes mellitusOpen Targets
0.11Weak
hepatocellular carcinomaOpen Targets
0.08Suggestive
pancreatic adenocarcinomaOpen Targets
0.04Suggestive
Hallux valgusOpen Targets
0.03Suggestive
ovarian neoplasmOpen Targets
0.02Suggestive
neoplasmOpen Targets
0.01Suggestive
gastric cancerOpen Targets
0.01Suggestive
cancerOpen Targets
0.01Suggestive
breast cancerOpen Targets
0.01Suggestive
glioblastoma multiformeOpen Targets
0.01Suggestive
juvenile dermatomyositisOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
ACTA1Protein interaction91%PLEK2Protein interaction72%RAC1Protein interaction70%ARHGAP25Shared pathway60%RND2Shared pathway40%CGNL1Shared pathway33%
Tissue Expression6 tissues
Heart
100%
Brain
75%
Liver
68%
Ovary
66%
Lung
54%
Bone Marrow
53%
Gene Interaction Network
Click a node to explore
ARHGAP12ACTA1PLEK2RAC1ARHGAP25RND2CGNL1
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q1RLN5
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.68LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.53 [0.41–0.68]
RankingsWhere ARHGAP12 stands among ~20K protein-coding genes
  • #9,173of 20,598
    Most Researched47
  • #5,074of 17,882
    Most Constrained (LOEUF)0.68
Genes detectedARHGAP12
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
ARHGAP12 and ARHGAP29 exert distinct regulatory effects on switching between two cell morphological states through GSK-3 activity.
PMID: 40053455
Cell Rep · 2025
1.00
2
Cloning and characterization of ARHGAP12, a novel human rhoGAP gene.
PMID: 11854031
Int J Biochem Cell Biol · 2002
0.90
3
ARHGAP12 suppresses F-actin assembly to control epithelial tight junction mechanics and paracellular leak pathway permeability.
PMID: 40198220
Cell Rep · 2025
0.80
4
RhoGTPases at the synapse: An embarrassment of choice.
PMID: 27492682
Small GTPases · 2017
0.70
5
RPEL-family rhoGAPs link Rac/Cdc42 GTP loading to G-actin availability.
PMID: 31209295
Nat Cell Biol · 2019
0.60