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GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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ARID4B
AT-rich interaction domain 4B
Chromosome 1 · 1q42.3
NCBI Gene: 51742Ensembl: ENSG00000054267.23HGNC: HGNC:15550UniProt: Q4LE39
81PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Highly ConstrainedTranscription Factor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
DNA bindingprotein bindingcytosoltranscription cis-regulatory region bindingAbnormality of the skeletal systemthyroiditisfemur fractureglomerulonephritis
✦AI Summary

ARID4B is an AT-rich interaction domain protein that functions as both a transcriptional repressor and coactivator with context-dependent roles in gene regulation. As a repressor, it functions within the Sin3A corepressor complex to mediate chr1 modifications 1. ARID4B contains an interdigitated double Tudor domain with DNA-binding activity, though with weaker DNA affinity than its homolog ARID4A due to specific residue differences affecting charge distribution 2. In normal physiology, ARID4B co-regulates spermatogenesis with ARID4A and participates in epigenetic modifications at imprinting centers. In cancer biology, ARID4B exhibits predominantly oncogenic functions across multiple malignancies. In glioblastoma, ARID4B overexpression correlates with WHO grade IV tumors, and its knockdown suppresses proliferation via PI3K/AKT pathway inhibition and induces G1 arrest 3. Similarly, in hepatocellular carcinoma, high ARID4B scores independently predict poor disease-free and overall survival, with knockdown suppressing PI3K/AKT signaling and cell invasion 4. In breast cancer, ARID4B expression promotes metastatic progression and predicts distant metastasis-free survival in ER+ tumors 5. Conversely, in prostate cancer, ARID4A and ARID4B downregulation associates with high Gleason scores and poor prognosis, suggesting tumor suppressor roles 6. In bladder cancer, miR-17-5p suppresses ARID4B expression to promote invasion 7. Overexpression of ARID4B isoforms induces G1 cell cycle arrest 8, indicating complex regulatory mechanisms dependent on tissue and genetic context.

Sources cited
1
ARID4B is an epigenetic regulator involved in stem cell fate and carcinogenesis, functioning within chromatin-modifying complexes
PMID: 40558499
2
ARID4B contains an interdigitated double Tudor domain with DNA-binding activity that has weaker DNA affinity than ARID4A due to Leu50/Glu50 residue difference
PMID: 33675746
3
ARID4B overexpression correlates with WHO grade IV gliomas; knockdown suppresses proliferation via PI3K/AKT inhibition and induces G1 arrest
PMID: 33732001
4
High ARID4B score independently predicts poor disease-free and overall survival in hepatocellular carcinoma; knockdown suppresses PI3K/AKT pathway and cell invasion
PMID: 39751985
5
ARID4B promotes breast cancer metastasis progression and is an independent predictor of distant metastasis-free survival in ER+ tumors
PMID: 22693453
6
In prostate cancer, ARID4A and ARID4B downregulation associates with high Gleason scores and poor prognosis, suggesting tumor suppressor roles
PMID: 29797600
7
miR-17-5p targets ARID4B to promote bladder cancer invasion and progression
PMID: 38383173
8
ARID4B isoforms induce G1 arrest when overexpressed in mammalian cells
PMID: 19657394
Disease Associationsⓘ20
Abnormality of the skeletal systemOpen Targets
0.30Weak
thyroiditisOpen Targets
0.27Weak
femur fractureOpen Targets
0.25Weak
glomerulonephritisOpen Targets
0.18Weak
neurodegenerative diseaseOpen Targets
0.15Weak
hypothyroidismOpen Targets
0.15Weak
asthmaOpen Targets
0.15Weak
neoplasmOpen Targets
0.09Suggestive
gliomaOpen Targets
0.08Suggestive
breast cancerOpen Targets
0.08Suggestive
prostate cancerOpen Targets
0.08Suggestive
acute lymphoblastic leukemiaOpen Targets
0.07Suggestive
non-small cell lung carcinomaOpen Targets
0.07Suggestive
severe malarial anemiaOpen Targets
0.05Suggestive
gastric cancerOpen Targets
0.05Suggestive
brain injuryOpen Targets
0.04Suggestive
type 2 diabetes mellitusOpen Targets
0.04Suggestive
hepatocellular carcinomaOpen Targets
0.04Suggestive
chronic myelogenous leukemiaOpen Targets
0.04Suggestive
obesityOpen Targets
0.03Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
H3-3BProtein interaction100%H3C13Protein interaction100%H3C12Protein interaction100%H2AZ2Protein interaction100%H2AZ1Protein interaction100%HDAC1Protein interaction99%
Tissue Expression6 tissues
Bone Marrow
100%
Brain
41%
Ovary
36%
Heart
30%
Lung
30%
Liver
23%
Gene Interaction Network
Click a node to explore
ARID4BH3-3BH3C13H3C12H2AZ2H2AZ1HDAC1
PROTEIN STRUCTURE
Preparing viewer…
PDB7DM4 · NMR
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.18Highly Constrained
pLIⓘ
1.00Intolerant
Observed/Expected LoF0.10 [0.06–0.18]
RankingsWhere ARID4B stands among ~20K protein-coding genes
  • #5,844of 20,598
    Most Researched81
  • #326of 17,882
    Most Constrained (LOEUF)0.18 · top 5%
Genes detectedARID4B
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
A versatile viral system for expression and depletion of proteins in mammalian cells.
PMID: 19657394
PLoS One · 2009
1.00
2
PMID: 33732001
Onco Targets Ther · 2021
0.90
3
Urinary Exosomal miR-17-5p Accelerates Bladder Cancer Invasion by Repressing its Target Gene ARID4B and Regulating the Immune Microenvironment.
PMID: 38383173
Clin Genitourin Cancer · 2024
0.80
4
ARID4B Promotes the Progression of Hepatocellular Carcinoma Through the PI3K/AKT Pathway.
PMID: 39751985
Ann Surg Oncol · 2025
0.70
5
Downregulation of ARID4A and ARID4B promote tumor progression and directly regulated by microRNA-30d in patient with prostate cancer.
PMID: 29797600
J Cell Biochem · 2018
0.60