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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
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AUTS2
activator of transcription and developmental regulator AUTS2
Chromosome 7 Β· 7q11.22
NCBI Gene: 26053Ensembl: ENSG00000158321.19HGNC: HGNC:14262UniProt: A0A024RDL5
89PubMed Papers
21Diseases
0Drugs
109Pathogenic Variants
FUNCTIONAL ROLE
Highly ConstrainedTranscription Factor
RESEARCH IMPACT
Variant-Rich
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
nucleoplasmpositive regulation of transcription by RNA polymerase IIprotein bindingchromatin bindingautism spectrum disorder due to AUTS2 deficiencysyndromic intellectual disabilitygenetic disordertype 2 diabetes mellitus
✦AI Summary

AUTS2 is a transcriptional regulator with dual nuclear and cytoplasmic functions essential for neurodevelopment 1. In the nucleus, AUTS2 functions as a component of a PRC1-like Polycomb complex that mediates transcriptional activation through altered histone H2A ubiquitination 2. This complex regulates genes critical for cortical development, including control of neural progenitor cell proliferation and G1/S transition gene expression 3. In the cytoplasm, AUTS2 promotes neuronal migration, axon/dendrite elongation, and actin cytoskeleton reorganization through activation of RAC1 signaling 1. AUTS2 mutations cause AUTS2-related syndrome, characterized by intellectual disability, autism spectrum disorder, developmental delay, and microcephaly 4. The severity of neurological symptoms correlates with mutation locationβ€”variants affecting both long and short AUTS2 isoforms present with recognizable facial features and microcephaly, while variants affecting only the longer isoform show predominantly behavioral disorders 4. Cerebral organoid models demonstrate that pathogenic variants impair neural progenitor proliferation and disrupt cortical growth 3. AUTS2 is expressed in specific neuronal populations including pyramidal neurons and Purkinje cells, localizing primarily to cell nuclei where it regulates transcription and RNA metabolism 5.

Sources cited
1
AUTS2 is component of PRC1-like complex mediating histone H2A ubiquitination and transcriptional activation
PMID: 25519132
2
AUTS2 has dual cytoplasmic role in neuronal migration and actin cytoskeleton control, and nuclear role in transcription as PRC1 component
PMID: 28505103
3
AUTS2 variants impair neural progenitor cell proliferation, G1/S transition, and organoid growth; role in cortical development
PMID: 35802027
4
AUTS2-related syndrome characterized by developmental delay, autism, intellectual disability; genotype-phenotype correlations with isoform-specific effects
PMID: 39953909
5
AUTS2 structure contains conserved AUTS2 domain and low-complexity regions; expressed in specific progenitor and neuron types; localizes to nuclei
PMID: 35431798
6
AUTS2 regulates neurodevelopmental processes including neuronal migration, neuritogenesis, and excitatory synapse balance
PMID: 35011572
Disease Associationsβ“˜21
autism spectrum disorder due to AUTS2 deficiencyOpen Targets
0.75Strong
syndromic intellectual disabilityOpen Targets
0.60Moderate
genetic disorderOpen Targets
0.53Moderate
type 2 diabetes mellitusOpen Targets
0.51Moderate
obesityOpen Targets
0.49Moderate
overnutritionOpen Targets
0.47Moderate
Abnormality of the skeletal systemOpen Targets
0.44Moderate
multiple congenital anomalies/dysmorphic syndrome-intellectual disabilityOpen Targets
0.44Moderate
hypertensionOpen Targets
0.44Moderate
Intellectual disabilityOpen Targets
0.43Moderate
smoking initiationOpen Targets
0.42Moderate
risk-taking behaviourOpen Targets
0.42Moderate
diabetes mellitusOpen Targets
0.41Moderate
autismOpen Targets
0.40Moderate
autism spectrum disorderOpen Targets
0.40Weak
attention deficit hyperactivity disorderOpen Targets
0.39Weak
sleep apneaOpen Targets
0.38Weak
diabetic eye diseaseOpen Targets
0.38Weak
diabetic retinopathyOpen Targets
0.37Weak
obstructive sleep apneaOpen Targets
0.37Weak
Intellectual developmental disorder, autosomal dominant 26UniProt
Pathogenic Variants109
NM_015570.4(AUTS2):c.454C>T (p.Arg152Ter)Pathogenic
Autism spectrum disorder due to AUTS2 deficiency|not provided|Inborn genetic diseases
β˜…β˜…β˜†β˜†2025β†’ Residue 152
NM_015570.4(AUTS2):c.1483C>T (p.Arg495Ter)Pathogenic
not provided|Intellectual disability|Autism spectrum disorder due to AUTS2 deficiency
β˜…β˜…β˜†β˜†2025β†’ Residue 495
NM_015570.4(AUTS2):c.376C>T (p.Arg126Ter)Pathogenic
not provided|Intellectual disability, autosomal dominant 57|Autism spectrum disorder due to AUTS2 deficiency
β˜…β˜…β˜†β˜†2025β†’ Residue 126
NM_015570.4(AUTS2):c.2005-1G>CLikely pathogenic
Autism spectrum disorder due to AUTS2 deficiency|not provided
β˜…β˜…β˜†β˜†2025
NM_015570.4(AUTS2):c.2481_2482del (p.Asp827fs)Pathogenic
Inborn genetic diseases|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 827
NM_015570.4(AUTS2):c.1A>G (p.Met1Val)Pathogenic
not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 1
NM_015570.4(AUTS2):c.2392C>T (p.Arg798Ter)Pathogenic
not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 798
NM_015570.4(AUTS2):c.1298del (p.Leu433fs)Pathogenic
not provided|Autism spectrum disorder due to AUTS2 deficiency
β˜…β˜…β˜†β˜†2024β†’ Residue 433
NM_015570.4(AUTS2):c.901C>T (p.Gln301Ter)Pathogenic
Autism spectrum disorder due to AUTS2 deficiency
β˜…β˜…β˜†β˜†2023β†’ Residue 301
NM_015570.4(AUTS2):c.1464_1467del (p.Thr487_Tyr488insTer)Pathogenic
not provided|Autism spectrum disorder due to AUTS2 deficiency
β˜…β˜…β˜†β˜†2023β†’ Residue 487
NM_015570.4(AUTS2):c.946C>T (p.Arg316Ter)Pathogenic
not provided|Autism spectrum disorder due to AUTS2 deficiency
β˜…β˜…β˜†β˜†2023β†’ Residue 316
NM_015570.4(AUTS2):c.940C>T (p.Gln314Ter)Pathogenic
Autism spectrum disorder due to AUTS2 deficiency|AUTS2-related disorder
β˜…β˜…β˜†β˜†2022β†’ Residue 314
NM_015570.4(AUTS2):c.784C>T (p.Gln262Ter)Likely pathogenic
Autism spectrum disorder due to AUTS2 deficiency
β˜…β˜…β˜†β˜†2022β†’ Residue 262
NM_015570.4(AUTS2):c.1018C>T (p.Gln340Ter)Pathogenic
Autism spectrum disorder due to AUTS2 deficiency|not provided
β˜…β˜…β˜†β˜†2021β†’ Residue 340
NM_015570.4(AUTS2):c.742+1G>APathogenic
not provided|Autism spectrum disorder due to AUTS2 deficiency
β˜…β˜…β˜†β˜†2020
NM_015570.4(AUTS2):c.1534dup (p.Ala512fs)Pathogenic
Autism spectrum disorder due to AUTS2 deficiency
β˜…β˜…β˜†β˜†2018β†’ Residue 512
NM_015570.4(AUTS2):c.737del (p.Asn246fs)Pathogenic
Autism spectrum disorder due to AUTS2 deficiency
β˜…β˜†β˜†β˜†2026β†’ Residue 246
NM_015570.4(AUTS2):c.593_603del (p.His198fs)Pathogenic
AUTS2-related neurodevelopmental disorder
β˜…β˜†β˜†β˜†2025β†’ Residue 198
NM_015570.4(AUTS2):c.1005del (p.Pro336fs)Pathogenic
Autism spectrum disorder due to AUTS2 deficiency
β˜…β˜†β˜†β˜†2025β†’ Residue 336
Single allelePathogenic
Autism spectrum disorder due to AUTS2 deficiency
β˜…β˜†β˜†β˜†2025
View on ClinVar β†—
Related Genes
PCGF6Protein interaction100%DCAF7Protein interaction96%PCGF5Protein interaction92%RNF2Protein interaction91%CSNK2A1Protein interaction85%CSNK2A2Protein interaction85%
Tissue Expression6 tissues
Liver
100%
Brain
94%
Ovary
80%
Lung
51%
Bone Marrow
35%
Heart
17%
Gene Interaction Network
Click a node to explore
AUTS2PCGF6DCAF7PCGF5RNF2CSNK2A1CSNK2A2
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt Q8WXX7
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
0.23Highly Constrained
pLIβ“˜
1.00Intolerant
Observed/Expected LoF0.15 [0.10–0.23]
RankingsWhere AUTS2 stands among ~20K protein-coding genes
  • #5,351of 20,598
    Most Researched89
  • #718of 5,498
    Most Pathogenic Variants109 Β· top quartile
  • #645of 17,882
    Most Constrained (LOEUF)0.23 Β· top 5%
Genes detectedAUTS2
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
AUTS2-related syndrome: Insights from a large European cohort.
PMID: 39953909
Genet Med Β· 2025
1.00
2
The role of AUTS2 in neurodevelopment and human evolution.
PMID: 24008202
Trends Genet Β· 2013
0.90
3
De Novo Pathogenic Variant in
PMID: 39062605
Genes (Basel) Β· 2024
0.80
4
Cerebral organoids containing an AUTS2 missense variant model microcephaly.
PMID: 35802027
Brain Β· 2023
0.70
5
AUTS2 Syndrome: Molecular Mechanisms and Model Systems.
PMID: 35431798
Front Mol Neurosci Β· 2022
0.60