10 sources retrieved · Most recent: April 2026 · Index updated 16 days ago
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28PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingnegative regulation of pre-miRNA processingcytoplasmcytosoltype 2 diabetes mellitusmetabolic syndromeaortic diseaseobesity
BCDIN3D is an O-methyltransferase that functions as a cytoplasmic tRNA-His specific 5'-monomethylphosphate capping enzyme. The enzyme specifically monomethylates the 5'-monophosphate of cytoplasmic histidyl tRNA (tRNA-His), recognizing its unique structural features including the G-1:A73 mispair at the top of an eight-nucleotide-long acceptor helix 1 2. This methylation protects tRNA-His from degradation by shielding it from cleavage by DICER1 2. BCDIN3D also methylates the 5'-monophosphate of certain pre-miRNAs, though with lower efficiency, acting as a negative regulator of miRNA processing by reducing DICER1-mediated cleavage 2. The enzyme adopts a classical Rossmann-fold methyltransferase structure and uses S-adenosyl-L-methionine as a methyl group donor 1. BCDIN3D is clinically significant as it is overexpressed in breast cancer and associated with poor prognosis 1 2. The enzyme regulates glycolytic metabolism through the let-7 microRNA pathway, affecting Aldolase C expression 3. Genetic variants in BCDIN3D are associated with obesity-related phenotypes and weight gain 4, suggesting broader metabolic functions beyond RNA modification.
1
BCDIN3D monomethylates 5'-monophosphate of cytoplasmic tRNA-His with G-1:A73 mispair, adopts Rossmann-fold structure, and is associated with breast cancer
PMID: 319195122
BCDIN3D is primary methyltransferase for cytoplasmic tRNA-His, protects from DICER1 cleavage, methylates pre-miRNAs, and is overexpressed in breast cancer
PMID: 281194163
BCDIN3D regulates glycolytic metabolism through let-7 microRNA pathway and Aldolase C expression
PMID: 336644534
BCDIN3D genetic variants are associated with obesity-related phenotypes and weight gain
PMID: 36345912⚠Limited data available — This gene has 4 indexed publications. Summary and analysis may be incomplete.
type 2 diabetes mellitusOpen Targets
metabolic syndromeOpen Targets
aortic diseaseOpen Targets
breast cancerOpen Targets
smoking behaviorOpen Targets
diabetes mellitusOpen Targets
diabetic neuropathyOpen Targets
overnutritionOpen Targets
essential hypertensionOpen Targets
diabetic eye diseaseOpen Targets
morbid obesityOpen Targets
lymphatic system cancerOpen Targets
triple-negative breast cancerOpen Targets
cervical cancerOpen Targets
female infertilityOpen Targets
No pathogenic variants reported on ClinVar for this gene.