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27 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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CBX4
chromobox 4
Chromosome 17 · 17q25.3
NCBI Gene: 8535Ensembl: ENSG00000141582.16HGNC: HGNC:1554UniProt: A0A0S2Z5B2
160PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Hub GeneTranscription Factor
RESEARCH IMPACT
Trending
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
nucleusnuclear bodyprotein bindingPcG protein complexAbnormality of the skeletal systemrheumatic diseaseAbnormal foot morphologyobesity
✦AI Summary

CBX4 (chr17 4) functions as both a SUMO E3 ligase and a component of the Polycomb Repressive Complex 1 (PRC1), playing critical roles in transcriptional regulation and cellular processes 1. As a SUMO E3 ligase, CBX4 catalyzes SUMOylation of multiple target proteins, including YAP1, EZH2, and HIF-1α, thereby modulating their stability and activity 213. Within PRC1, CBX4 contributes to transcriptional repression through chr17 modifications and can form phase-separated nuclear bodies on target gene promoters 14. CBX4 demonstrates context-dependent functions in cancer progression. In gastric cancer, it promotes chemoresistance by SUMOylating YAP1 and counteracting cellular senescence 2. In lung adenocarcinoma, CBX4 exhibits bidirectional effects—promoting proliferation through PHGDH upregulation while suppressing metastasis via ZEB2 repression 5. Additionally, CBX4 deletion can paradoxically promote tumorigenesis under oncogenic Kras backgrounds due to induced genomic instability 6. In immune contexts, CBX4 suppresses CD8+ T cell function by regulating glucose metabolism through SUMOylation of transcription factors SP1 and KLF3 7. These diverse functions highlight CBX4's importance in cellular homeostasis, making it a potential therapeutic target across multiple pathological conditions 8.

Sources cited
1
CBX4 promotes chemoresistance in gastric cancer by SUMOylating YAP1 and counteracting cellular senescence
PMID: 39154499
2
CBX4 suppresses CD8+ T cell function by regulating glucose metabolism through SUMOylation of SP1 and KLF3
PMID: 38994031
3
CBX4 deletion promotes tumorigenesis under KrasG12D background due to genomic instability
PMID: 37696812
4
CBX4 forms phase-separated nuclear bodies and SUMOylates EZH2 to maintain HIV-1 latency
PMID: 35642598
5
CBX4 enhances HIF-1α SUMOylation to promote angiogenesis in hepatocellular carcinoma
PMID: 24434214
6
CBX4-containing cPRC1 drives oncogenic gene repression in diffuse midline glioma
PMID: 40403727
7
CBX4 has bidirectional effects in lung adenocarcinoma, promoting proliferation while suppressing metastasis
PMID: 38816356
8
CBX4 regulates senescence and various diseases through its SUMO E3 ligase activity
PMID: 40120729
Disease Associationsⓘ20
Abnormality of the skeletal systemOpen Targets
0.53Moderate
rheumatic diseaseOpen Targets
0.27Weak
Abnormal foot morphologyOpen Targets
0.23Weak
obesityOpen Targets
0.22Weak
corneal ulcerOpen Targets
0.22Weak
neurodegenerative diseaseOpen Targets
0.15Weak
coronary artery diseaseOpen Targets
0.13Weak
gastric cancerOpen Targets
0.10Weak
neoplasmOpen Targets
0.10Weak
hepatocellular carcinomaOpen Targets
0.10Suggestive
lung adenocarcinomaOpen Targets
0.10Suggestive
osteosarcomaOpen Targets
0.09Suggestive
nonpapillary renal cell carcinomaOpen Targets
0.09Suggestive
prostate cancerOpen Targets
0.09Suggestive
lung cancerOpen Targets
0.08Suggestive
esophageal squamous cell carcinomaOpen Targets
0.08Suggestive
cervical cancerOpen Targets
0.08Suggestive
nail-patella syndromeOpen Targets
0.07Suggestive
breast cancerOpen Targets
0.07Suggestive
colorectal carcinomaOpen Targets
0.06Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SUZ12Protein interaction100%CBX8Protein interaction100%CDC27Protein interaction99%COMMD3-BMI1Protein interaction99%HDAC2Protein interaction99%ANAPC10Protein interaction99%
Tissue Expression6 tissues
Bone Marrow
100%
Brain
28%
Liver
24%
Lung
18%
Ovary
13%
Heart
11%
Gene Interaction Network
Click a node to explore
CBX4SUZ12CBX8CDC27COMMD3-BMI1HDAC2ANAPC10
PROTEIN STRUCTURE
Preparing viewer…
PDB3I8Z · 1.51 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.48Moderately Constrained
pLIⓘ
0.99Intolerant
Observed/Expected LoF0.26 [0.14–0.48]
RankingsWhere CBX4 stands among ~20K protein-coding genes
  • #2,802of 20,598
    Most Researched160 · top quartile
  • #2,799of 17,882
    Most Constrained (LOEUF)0.48 · top quartile
Genes detectedCBX4
Sources retrieved27 papers
Response time—
📄 Sources
27▼
1
CBX4 counteracts cellular senescence to desensitize gastric cancer cells to chemotherapy by inducing YAP1 SUMOylation.
PMID: 39154499
Drug Resist Updat · 2024
1.00
2
CBX4 suppresses CD8
PMID: 38994031
Theranostics · 2024
0.90
3
Conversion of Ku80 K568 crotonylation to SUMOylation facilitates DNA non-homologous end joining and cancer radioresistance.
PMID: 40254688
Signal Transduct Target Ther · 2025
0.84
4
CBX4 deletion promotes tumorigenesis under Kras
PMID: 37696812
Signal Transduct Target Ther · 2023
0.80
5
Deficient H2A.Z deposition is associated with genesis of uterine leiomyoma.
PMID: 34349258
Nature · 2021
0.72