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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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CDC42EP3
CDC42 effector protein 3
Chromosome 2 · 2p22.2
NCBI Gene: 10602Ensembl: ENSG00000163171.9HGNC: HGNC:16943UniProt: Q9UKI2
52PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingplasma membraneactin cytoskeletonregulation of cell shapeAbnormality of the skeletal systemalcohol drinkingskin agingprostate carcinoma
✦AI Summary

CDC42EP3 (CDC42 effector protein 3) is a key cytoskeletal regulatory protein that coordinates actin and septin networks downstream of the small GTPase CDC42. CDC42EP3 directly binds to septins, actin filaments, and actin monomers, with septin-bound CDC42EP3 accelerating actin filament polymerization 1. The protein plays a critical role in cellular mechanotransduction by sensitizing fibroblasts to mechanical cues and enabling the emergence of cancer-associated fibroblasts (CAFs) through coordination of actin and septin networks 2. CDC42EP3 function requires tight regulation by CDC42, and its expression precedes the highly contractile phenotype characteristic of activated fibroblasts 3. In cancer contexts, CDC42EP3 acts as a tumor promoter across multiple cancer types including gliomas, osteosarcoma, and gastric cancer, where it promotes cell proliferation, migration, and tumor growth while inhibiting apoptosis 456. The protein regulates oncogenic pathways including CCND1 expression through c-Myc-mediated transcription in gliomas and modulates PI3K/AKT/mTOR signaling in osteosarcoma 45. Additionally, overactivated CDC42 acting through CDC42EP3 can trigger DNA damage response signaling, sensitizing cells to genotoxic stress 7. CDC42EP3 has emerged as a potential therapeutic target for various cancers and intervertebral disc degeneration 8.

Sources cited
1
CDC42EP3 directly binds septins, actin filaments, and monomers, and septin-bound CDC42EP3 accelerates actin polymerization
PMID: 39971161
2
CDC42EP3 coordinates actin and septin networks and is required for cancer-associated fibroblast mechanotransduction abilities
PMID: 26711338
3
CDC42EP3 function in CAFs requires tight regulation by CDC42
PMID: 27248291
4
CDC42EP3 promotes glioma progression and regulates CCND1 expression through c-Myc-mediated transcription
PMID: 35365622
5
CDC42EP3 promotes osteosarcoma development and modulates PI3K/AKT/mTOR signaling pathway
PMID: 34998812
6
CDC42EP3 acts as tumor promoter in gastric cancer development and progression
PMID: 34111280
7
Overactivated CDC42 through CDC42EP3 triggers DNA damage response signaling and sensitizes cells to genotoxic stress
PMID: 32739212
8
CDC42EP3 identified as candidate gene with diagnostic value in intervertebral disc degeneration
PMID: 39050860
Disease Associationsⓘ20
Abnormality of the skeletal systemOpen Targets
0.46Moderate
alcohol drinkingOpen Targets
0.37Weak
skin agingOpen Targets
0.35Weak
prostate carcinomaOpen Targets
0.33Weak
hypertensionOpen Targets
0.31Weak
rheumatoid arthritisOpen Targets
0.31Weak
neurodegenerative diseaseOpen Targets
0.29Weak
placental retentionOpen Targets
0.26Weak
response to xenobiotic stimulusOpen Targets
0.22Weak
endocarditisOpen Targets
0.13Weak
Abnormality of the gastrointestinal tractOpen Targets
0.10Weak
atrial fibrillationOpen Targets
0.09Suggestive
gliomaOpen Targets
0.07Suggestive
ovarian cancerOpen Targets
0.07Suggestive
Hallux valgusOpen Targets
0.07Suggestive
isolated asymptomatic elevation of creatine phosphokinaseOpen Targets
0.06Suggestive
colorectal cancerOpen Targets
0.06Suggestive
pentosuriaOpen Targets
0.04Suggestive
neoplasmOpen Targets
0.04Suggestive
cancerOpen Targets
0.04Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
C15orf62Shared pathway100%CDC42EP4Shared pathway100%RHOQProtein interaction98%CDC42Protein interaction98%SEPTIN7Protein interaction97%CDC42EP5Protein interaction90%
Tissue Expression6 tissues
Heart
100%
Lung
69%
Bone Marrow
38%
Brain
33%
Ovary
28%
Liver
8%
Gene Interaction Network
Click a node to explore
CDC42EP3C15orf62CDC42EP4RHOQCDC42SEPTIN7CDC42EP5
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q9UKI2
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.56Moderately Constrained
pLIⓘ
0.93Intolerant
Observed/Expected LoF0.24 [0.12–0.56]
RankingsWhere CDC42EP3 stands among ~20K protein-coding genes
  • #8,537of 20,598
    Most Researched52
  • #3,610of 17,882
    Most Constrained (LOEUF)0.56 · top quartile
Genes detectedCDC42EP3
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Identification of core genes in intervertebral disc degeneration using bioinformatics and machine learning algorithms.
PMID: 39050860
Front Immunol · 2024
1.00
2
Cdc42EP3-bound septin scaffolds promote actin polymerization.
PMID: 39971161
J Biol Chem · 2025
0.90
3
Cdc42EP3/BORG2 and Septin Network Enables Mechano-transduction and the Emergence of Cancer-Associated Fibroblasts.
PMID: 26711338
Cell Rep · 2015
0.80
4
CDC42EP3 promotes glioma progression via regulation of CCND1.
PMID: 35365622
Cell Death Dis · 2022
0.70
5
Deduction of CDC42EP3 suppress development and progression of osteosarcoma.
PMID: 34998812
Exp Cell Res · 2022
0.60