HomeAboutRankingsData Sources
Β© 2026 GeneE
🧬
GeneE
25 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
CEP290
centrosomal protein 290
Chromosome 12 Β· 12q21.32
NCBI Gene: 80184Ensembl: ENSG00000198707.17HGNC: HGNC:29021UniProt: A0A6Q8PGB1
169PubMed Papers
25Diseases
1Drugs
950Pathogenic Variants
FUNCTIONAL ROLE
Hub GeneTransporter
RESEARCH IMPACT
TrendingVariant-Rich
CLINICAL
FDA Approved TargetOMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
protein-containing complexmicrotubule minus-end bindingregulation of establishment of protein localizationcentriolar satelliteJoubert syndrome 5Senior-Loken syndrome 6Leber congenital amaurosis 10Meckel syndrome, type 4
✦AI Summary

CEP290 is a centrosomal protein essential for ciliogenesis and ciliary function. It plays critical roles in early ciliogenesis by regulating centriolar satellite disappearance and primary ciliary vesicle transition, and is required for centrosomal recruitment of RAB8A and proper localization of centriole satellite proteins 1. CEP290 participates in the ciliary transition zone as part of the tectonic-like complex regulating tissue-specific ciliogenesis and ciliary membrane composition 2. The protein controls BBSome complex integrity and ciliary cargo targeting 3, and activates ATF4-mediated transcription 4. CEP290 mutations cause multiple syndromic ciliopathies: Joubert syndrome (characterized by cerebellar-brainstem malformation), Leber congenital amaurosis type 10 (severe early-onset retinal dystrophy), Bardet-Biedl syndrome, Meckel syndrome, and Senior-Loken syndrome 52. Loss of CEP290 function is particularly associated with retinal dystrophy and chr12 kidney disease, requiring closer clinical surveillance 52. The IVS26 splice variant accounts for a significant disease subtype. Recent CRISPR-Cas9 gene editing therapy (EDIT-101) targeting the IVS26 variant demonstrated safety and photoreceptor function improvement in clinical trials, representing a promising therapeutic approach for CEP290-associated inherited retinal degeneration 67.

Sources cited
1
CEP290 required for centrosomal recruitment of RAB8A and targeting of centriole satellite proteins to centrosomes
PMID: 24421332
2
CEP290 participates in ciliary transition zone assembly; individuals with CEP290 variants need surveillance for retinal dystrophy and chronic kidney disease
PMID: 35238134
3
CEP290 involved in regulation of BBSome complex integrity and ciliary cargo targeting
PMID: 25552655
4
CEP290 activates ATF4-mediated transcription
PMID: 16682973
5
Loss of CEP290 function associated with retinal dystrophy in Joubert syndrome; CEP290 mutations identified in JS patients
PMID: 26092869
6
EDIT-101 CRISPR-Cas9 gene editing for CEP290 IVS26 variant showed safety and improvements in photoreceptor function and visual outcomes
PMID: 38709228
7
EDIT-101 removes aberrant splice donor created by IVS26 CEP290 mutation to restore normal CEP290 expression; demonstrated productive editing in vivo
PMID: 30664785
Disease Associationsβ“˜25
Joubert syndrome 5Open Targets
0.82Strong
Senior-Loken syndrome 6Open Targets
0.81Strong
Leber congenital amaurosis 10Open Targets
0.81Strong
Meckel syndrome, type 4Open Targets
0.80Strong
Bardet-Biedl syndrome 14Open Targets
0.75Strong
CEP290-related ciliopathyOpen Targets
0.75Strong
Meckel syndromeOpen Targets
0.73Strong
Leber congenital amaurosisOpen Targets
0.70Strong
Joubert syndromeOpen Targets
0.65Moderate
Senior-Loken syndromeOpen Targets
0.64Moderate
Joubert syndrome with oculorenal defectOpen Targets
0.62Moderate
Retinal dystrophyOpen Targets
0.57Moderate
nephronophthisisOpen Targets
0.57Moderate
retinitis pigmentosaOpen Targets
0.56Moderate
genetic disorderOpen Targets
0.54Moderate
Joubert syndrome 1Open Targets
0.53Moderate
Bardet-Biedl syndrome 1Open Targets
0.50Moderate
BlindnessOpen Targets
0.49Moderate
Polycystic Kidney DiseaseOpen Targets
0.48Moderate
Meckel syndrome, type 6Open Targets
0.46Moderate
Bardet-Biedl syndrome 14UniProt
Joubert syndrome 5UniProt
Leber congenital amaurosis 10UniProt
Meckel syndrome 4UniProt
Senior-Loken syndrome 6UniProt
Pathogenic Variants950
NM_025114.4(CEP290):c.3175del (p.Lys1058_Ile1059insTer)Pathogenic
Meckel syndrome, type 4|Joubert syndrome;Nephronophthisis;Meckel-Gruber syndrome|Joubert syndrome 5;Bardet-Biedl syndrome 14;Senior-Loken syndrome 6;Leber congenital amaurosis 10;Meckel syndrome, type 4|Bardet-Biedl syndrome 14
β˜…β˜…β˜†β˜†2026β†’ Residue 1058
NM_025114.4(CEP290):c.2390del (p.Lys797fs)Pathogenic
Retinitis pigmentosa|Joubert syndrome;Meckel-Gruber syndrome;Nephronophthisis|Bardet-Biedl syndrome 14;Joubert syndrome 5;Senior-Loken syndrome 6;Leber congenital amaurosis 10;Meckel syndrome, type 4|Joubert syndrome 5|not provided|Leber congenital amaurosis|Bardet-Biedl syndrome 14|CEP290-related disorder|Leber congenital amaurosis 10
β˜…β˜…β˜†β˜†2026β†’ Residue 797
NM_025114.4(CEP290):c.4040G>A (p.Trp1347Ter)Pathogenic
Meckel-Gruber syndrome;Joubert syndrome;Nephronophthisis|Bardet-Biedl syndrome 14|Leber congenital amaurosis 10;Joubert syndrome 5;Meckel syndrome, type 4;Bardet-Biedl syndrome 14;Senior-Loken syndrome 6
β˜…β˜…β˜†β˜†2026β†’ Residue 1347
NM_025114.4(CEP290):c.1219_1220del (p.Met407fs)Pathogenic
Meckel syndrome, type 4|Joubert syndrome 5|Retinal dystrophy|Joubert syndrome;Nephronophthisis;Meckel-Gruber syndrome|not provided|CEP290-related disorder|Leber congenital amaurosis|Leber congenital amaurosis 10|Joubert syndrome 5;Bardet-Biedl syndrome 14;Senior-Loken syndrome 6;Leber congenital amaurosis 10;Meckel syndrome, type 4|Bardet-Biedl syndrome 14|CEP290-related ciliopathy
β˜…β˜…β˜†β˜†2026β†’ Residue 407
NM_025114.4(CEP290):c.5445_5448del (p.Thr1816fs)Pathogenic
Nephronophthisis;Joubert syndrome;Meckel-Gruber syndrome|Leber congenital amaurosis|Bardet-Biedl syndrome 14|not provided|Bardet-Biedl syndrome 14;Leber congenital amaurosis 10;Meckel syndrome, type 4;Senior-Loken syndrome 6;Joubert syndrome 5
β˜…β˜…β˜†β˜†2026β†’ Residue 1816
NM_025114.4(CEP290):c.2991+1655A>GPathogenic
Leber congenital amaurosis 10|not provided|Retinitis pigmentosa|Joubert syndrome;Nephronophthisis;Meckel-Gruber syndrome|Senior-Loken syndrome 6;Bardet-Biedl syndrome 14;Leber congenital amaurosis 10;Joubert syndrome 5;Meckel syndrome, type 4|Retinal dystrophy|Joubert syndrome 5|Joubert syndrome 1|Leber congenital amaurosis|Intellectual disability|CEP290-related disorder|Bardet-Biedl syndrome 14
β˜…β˜…β˜†β˜†2026
NM_025114.4(CEP290):c.5813_5817del (p.Thr1938fs)Pathogenic
not provided|Nephronophthisis;Joubert syndrome;Meckel-Gruber syndrome|Leber congenital amaurosis|Meckel syndrome, type 4;Bardet-Biedl syndrome 14;Senior-Loken syndrome 6;Leber congenital amaurosis 10;Joubert syndrome 5|Bardet-Biedl syndrome 14|CEP290-related disorder
β˜…β˜…β˜†β˜†2026β†’ Residue 1938
NM_025114.4(CEP290):c.384_387del (p.Asp128fs)Pathogenic
Meckel syndrome, type 4|Joubert syndrome 5|Joubert syndrome;Nephronophthisis;Meckel-Gruber syndrome|CEP290-related disorder|not provided|Leber congenital amaurosis|Spastic ataxia|Leber congenital amaurosis 10|Joubert syndrome 5;Bardet-Biedl syndrome 14;Senior-Loken syndrome 6;Leber congenital amaurosis 10;Meckel syndrome, type 4|Bardet-Biedl syndrome 14
β˜…β˜…β˜†β˜†2026β†’ Residue 128
NM_025114.4(CEP290):c.289G>T (p.Glu97Ter)Pathogenic
Meckel syndrome, type 4|not provided|Joubert syndrome;Nephronophthisis;Meckel-Gruber syndrome|Leber congenital amaurosis|Bardet-Biedl syndrome 14|Retinal dystrophy|Joubert syndrome 5|CEP290-related ciliopathy
β˜…β˜…β˜†β˜†2026β†’ Residue 97
NM_025114.4(CEP290):c.6793_6794del (p.Ser2265fs)Likely pathogenic
Rod-cone dystrophy|Leber congenital amaurosis
β˜…β˜…β˜†β˜†2026β†’ Residue 2265
NM_025114.4(CEP290):c.3802C>T (p.Gln1268Ter)Pathogenic
Meckel-Gruber syndrome;Joubert syndrome;Nephronophthisis|Leber congenital amaurosis|Bardet-Biedl syndrome 14|CEP290-related ciliopathy
β˜…β˜…β˜†β˜†2026β†’ Residue 1268
NM_025114.4(CEP290):c.4882C>T (p.Gln1628Ter)Pathogenic
Joubert syndrome 5|Global developmental delay;Blindness|not provided|Occipital encephalocele;Cystic renal dysplasia|Leber congenital amaurosis 10;Senior-Loken syndrome 6;Bardet-Biedl syndrome 14;Meckel syndrome, type 4;Joubert syndrome 5|Meckel-Gruber syndrome;Joubert syndrome;Nephronophthisis|Leber congenital amaurosis|Inborn genetic diseases|Bardet-Biedl syndrome 14|CEP290-related disorder|Retinal dystrophy
β˜…β˜…β˜†β˜†2026β†’ Residue 1628
NM_025114.4(CEP290):c.6798G>A (p.Trp2266Ter)Pathogenic
not provided|Nephronophthisis;Joubert syndrome;Meckel-Gruber syndrome|Leber congenital amaurosis 10|Kidney disorder|CEP290-related disorder|Leber congenital amaurosis 10;Senior-Loken syndrome 6;Meckel syndrome, type 4;Joubert syndrome 5;Bardet-Biedl syndrome 14|Bardet-Biedl syndrome 14|Leber congenital amaurosis|CEP290-related ciliopathy
β˜…β˜…β˜†β˜†2026β†’ Residue 2266
NM_025114.4(CEP290):c.1616del (p.Leu538_Leu539insTer)Pathogenic
Joubert syndrome;Meckel-Gruber syndrome;Nephronophthisis|Bardet-Biedl syndrome 14|CEP290-related ciliopathy
β˜…β˜…β˜†β˜†2026β†’ Residue 538
NM_025114.4(CEP290):c.2T>A (p.Met1Lys)Pathogenic
not provided|Nephronophthisis;Meckel-Gruber syndrome;Joubert syndrome|Senior-Loken syndrome 6;Joubert syndrome 5;Bardet-Biedl syndrome 14;Leber congenital amaurosis 10;Meckel syndrome, type 4|CEP290-related disorder|Retinal dystrophy|Leber congenital amaurosis
β˜…β˜…β˜†β˜†2026β†’ Residue 1
NM_025114.4(CEP290):c.3G>A (p.Met1Ile)Pathogenic
Meckel-Gruber syndrome;Nephronophthisis;Joubert syndrome|Leber congenital amaurosis|Meckel syndrome, type 4;Bardet-Biedl syndrome 14;Senior-Loken syndrome 6;Joubert syndrome 5;Leber congenital amaurosis 10
β˜…β˜…β˜†β˜†2026β†’ Residue 1
NM_025114.4(CEP290):c.6271-8T>GPathogenic
Joubert syndrome 1|Meckel-Gruber syndrome;Nephronophthisis;Joubert syndrome|See cases|Bardet-Biedl syndrome 14|Leber congenital amaurosis
β˜…β˜…β˜†β˜†2026
NM_025114.4(CEP290):c.1666dup (p.Ile556fs)Pathogenic
Joubert syndrome 5|Joubert syndrome 1|Meckel-Gruber syndrome;Joubert syndrome;Nephronophthisis|CEP290-related disorder|Leber congenital amaurosis|Abnormality of prenatal development or birth|not provided|Bardet-Biedl syndrome 14|Leber congenital amaurosis 10;Senior-Loken syndrome 6;Bardet-Biedl syndrome 14;Meckel syndrome, type 4;Joubert syndrome 5
β˜…β˜…β˜†β˜†2026β†’ Residue 556
NM_025114.4(CEP290):c.5745dup (p.Lys1916Ter)Pathogenic
Meckel syndrome, type 4|Meckel-Gruber syndrome;Joubert syndrome;Nephronophthisis|Bardet-Biedl syndrome 14|Meckel syndrome, type 4;Bardet-Biedl syndrome 14;Leber congenital amaurosis 10;Senior-Loken syndrome 6;Joubert syndrome 5|Leber congenital amaurosis
β˜…β˜…β˜†β˜†2026β†’ Residue 1916
NM_025114.4(CEP290):c.1623+1G>APathogenic
Joubert syndrome 5|Meckel-Gruber syndrome;Joubert syndrome;Nephronophthisis|Meckel syndrome, type 4|Bardet-Biedl syndrome 14|Leber congenital amaurosis 10;Senior-Loken syndrome 6;Bardet-Biedl syndrome 14;Meckel syndrome, type 4;Joubert syndrome 5|Leber congenital amaurosis 10|Retinal disorder|Leber congenital amaurosis
β˜…β˜…β˜†β˜†2026
View on ClinVar β†—
Drug Targets1
SEPOFARSENApproved
CEP290 mRNA positive modulator
eye disease
Related Genes
BBS5Protein interaction100%RAB8AProtein interaction99%TCTN3Protein interaction97%B9D1Protein interaction97%TMEM231Protein interaction97%TCTN2Protein interaction97%
Tissue Expression6 tissues
Bone Marrow
100%
Ovary
96%
Heart
44%
Lung
32%
Liver
28%
Brain
21%
Gene Interaction Network
Click a node to explore
CEP290BBS5RAB8ATCTN3B9D1TMEM231TCTN2
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt O15078
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
1.09LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.95 [0.83–1.09]
RankingsWhere CEP290 stands among ~20K protein-coding genes
  • #2,619of 20,598
    Most Researched169 Β· top quartile
  • #886of 1,025
    FDA-Approved Drug Targets1
  • #40of 5,498
    Most Pathogenic Variants950 Β· top 1%
  • #11,152of 17,882
    Most Constrained (LOEUF)1.09
Genes detectedCEP290
Sources retrieved25 papers
Response timeβ€”
πŸ“„ Sources
25β–Ό
1
Joubert syndrome: a model for untangling recessive disorders with extreme genetic heterogeneity.
PMID: 26092869
J Med Genet Β· 2015
1.00
2
Gene Editing for
PMID: 38709228
N Engl J Med Β· 2024
0.90
3
Genotype-phenotype correlates in Joubert syndrome: A review.
PMID: 35238134
Am J Med Genet C Semin Med Genet Β· 2022
0.80
4
PMID: 20301537
0.70
5
Leber's Congenital Amaurosis: Current Concepts of Genotype-Phenotype Correlations.
PMID: 34440435
Genes (Basel) Β· 2021
0.60