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GeneE
50 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
CHEK2
checkpoint kinase 2
Chromosome 22 Β· 22q12.1
NCBI Gene: 11200Ensembl: ENSG00000183765.24HGNC: HGNC:16627UniProt: A0A7P0MUT5
690PubMed Papers
24Diseases
2Drugs
1,069Pathogenic Variants
FUNCTIONAL ROLE
DNA RepairHub GeneKinaseTranscription FactorTumor Suppressor
RESEARCH IMPACT
Highly StudiedTrendingVariant-Rich
CLINICAL
Clinical TrialsOMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
DNA damage responsesignal transduction in response to DNA damagechromosome, telomeric regionprotein catabolic processbreast cancerbreast neoplasmbreast carcinomaHereditary breast cancer
✦AI Summary

CHEK2 encodes checkpoint kinase 2 (CHK2), a serine/threonine kinase that plays a critical role in the DNA damage response pathway. CHK2 functions as part of the ATM-CHEK2-p53 axis, which serves as a backbone for DNA damage response to double-strand breaks, though its role in p53-dependent cell cycle arrest is dispensable 1. The protein participates in various cellular processes including DNA repair, cell cycle checkpoints, and apoptosis signaling in response to DNA damage. Functionally, CHK2 phosphorylates downstream targets to coordinate DNA damage responses, with activity dependent on proper folding of its kinase and forkhead-associated domains 2. Germline pathogenic variants in CHEK2 are associated with moderate cancer risk, particularly breast cancer. Protein-truncating variants confer a 3.11-fold increased breast cancer risk, with stronger associations for estrogen receptor-positive disease 3. Functionally deleterious missense variants also significantly increase breast cancer risk (OR=3.90) 4. CHEK2 variants are among the most frequent germline alterations identified in hereditary cancer testing 1. Clinical management requires personalized risk assessment, as cancer risks vary based on family history and other modifiers, with some individuals having risks similar to the general population while others qualify for high-risk surveillance 5.

Sources cited
1
CHK2 kinase is part of the ATM-CHEK2-p53 DNA damage response axis and CHEK2 mutations are among the most frequent germline alterations in hereditary cancer testing
PMID: 33322746
2
CHK2 function depends on proper folding of kinase and forkhead-associated domains, with non-functional variants predominantly localized in these domains
PMID: 30851065
3
CHEK2 truncating variants confer 3.11-fold increased breast cancer risk with stronger association for ER-positive disease
PMID: 28779002
4
Functionally deleterious CHEK2 missense variants significantly increase breast cancer risk with OR=3.90
PMID: 31050813
5
CHEK2 is considered a moderate penetrance gene requiring personalized risk assessment for clinical management
PMID: 37490054
Disease Associationsβ“˜24
breast cancerOpen Targets
0.82Strong
breast neoplasmOpen Targets
0.79Strong
breast carcinomaOpen Targets
0.74Strong
Hereditary breast cancerOpen Targets
0.73Strong
hereditary breast carcinomaOpen Targets
0.73Strong
bone osteosarcomaOpen Targets
0.71Strong
prostate cancerOpen Targets
0.68Moderate
Li-Fraumeni syndromeOpen Targets
0.67Moderate
CHEK2-related cancer predispositionOpen Targets
0.67Moderate
Familial prostate cancerOpen Targets
0.66Moderate
cancerOpen Targets
0.66Moderate
Hereditary breast and ovarian cancer syndromeOpen Targets
0.66Moderate
neoplasmOpen Targets
0.65Moderate
prostate carcinomaOpen Targets
0.64Moderate
susceptibility to breast cancerOpen Targets
0.63Moderate
hereditary neoplastic syndromeOpen Targets
0.58Moderate
Inherited cancer-predisposing syndromeOpen Targets
0.58Moderate
lung carcinomaOpen Targets
0.57Moderate
hereditary breast ovarian cancer syndromeOpen Targets
0.57Moderate
colorectal cancerOpen Targets
0.56Moderate
Breast cancerUniProt
Osteogenic sarcomaUniProt
Prostate cancerUniProt
Tumor predisposition syndrome 4UniProt
Pathogenic Variants1,069
NM_007194.4(CHEK2):c.846+4_846+7delPathogenic
Familial cancer of breast|Hereditary cancer-predisposing syndrome|not specified|not provided|Familial cancer of breast;CHEK2-related cancer predisposition|Carcinoma of pancreas|Hereditary breast ovarian cancer syndrome|Endometrial carcinoma|CHEK2-related cancer predisposition|Breast-ovarian cancer, familial, susceptibility to, 1|CHEK2-related cancer predisposition;Bone osteosarcoma;Familial prostate cancer|Hereditary nonpolyposis colon cancer
β˜…β˜…β˜†β˜†2026
NM_007194.4(CHEK2):c.1263del (p.Ser422fs)Pathogenic
Hereditary cancer-predisposing syndrome|Familial cancer of breast|not provided|Hereditary breast ovarian cancer syndrome|Prostate cancer|Predisposition to cancer|Breast and/or ovarian cancer|CHEK2-related cancer predisposition|Bone osteosarcoma;Familial prostate cancer;CHEK2-related cancer predisposition|Cancer or benign tumor|CHEK2-related disorder|Inherited prostate cancer|Inherited breast cancer and ovarian cancer
β˜…β˜…β˜†β˜†2026β†’ Residue 422
NM_007194.4(CHEK2):c.349A>G (p.Arg117Gly)Pathogenic
Hereditary cancer-predisposing syndrome|Familial cancer of breast|not provided|Prostate cancer susceptibility;Breast cancer, susceptibility to|Malignant tumor of breast|CHEK2-related cancer predisposition|Hereditary breast ovarian cancer syndrome|Breast and/or ovarian cancer|Predisposition to cancer|CHEK2-related disorder|Inherited breast cancer and ovarian cancer|Bone osteosarcoma;Familial prostate cancer;CHEK2-related cancer predisposition
β˜…β˜…β˜†β˜†2026β†’ Residue 117
NM_007194.4(CHEK2):c.1100del (p.Thr367fs)Pathogenic
CHEK2-related cancer predisposition|Hereditary cancer-predisposing syndrome|Familial cancer of breast|not provided|Breast and colorectal cancer, susceptibility to|Breast neoplasm|Breast cancer, susceptibility to|Leiomyosarcoma;Breast neoplasm|Familial cancer of breast;Bone osteosarcoma;CHEK2-related cancer predisposition;Prostate cancer|Li-Fraumeni syndrome|Astrocytoma|Breast and/or ovarian cancer|Malignant tumor of breast|Bone osteosarcoma|Carcinoma of pancreas|Breast carcinoma|Hereditary breast ovarian cancer syndrome|Predisposition to cancer|TUMOR PREDISPOSITION SYNDROME 4, BREAST/PROSTATE/COLORECTAL|Colorectal cancer|Ovarian neoplasm|NICE approved PARP inhibitor treatment|Prostate cancer|CHEK2-related disorder|Li-Fraumeni syndrome 1|Breast-ovarian cancer, familial, susceptibility to, 1|Inherited breast cancer and ovarian cancer|Bone osteosarcoma;Familial prostate cancer;CHEK2-related cancer predisposition|Familial cancer of breast;Familial prostate cancer;Colorectal cancer|Inherited prostate cancer
β˜…β˜…β˜†β˜†2026β†’ Residue 367
NM_007194.4(CHEK2):c.1368dup (p.Glu457fs)Pathogenic
Hereditary cancer-predisposing syndrome|not provided|Familial cancer of breast|CHEK2-related disorder|Inherited breast cancer and ovarian cancer|Predisposition to cancer|CHEK2-related cancer predisposition;Familial prostate cancer;Bone osteosarcoma|CHEK2-related cancer predisposition
β˜…β˜…β˜†β˜†2026β†’ Residue 457
NM_007194.4(CHEK2):c.433C>T (p.Arg145Trp)Likely pathogenic
CHEK2-related cancer predisposition|Hereditary cancer-predisposing syndrome|Familial cancer of breast|not specified|not provided|Li-Fraumeni syndrome|Malignant tumor of breast|Breast and/or ovarian cancer|Gastric cancer|Li-Fraumeni syndrome 1|Breast-ovarian cancer, familial, susceptibility to, 1|Hereditary breast ovarian cancer syndrome
β˜…β˜…β˜†β˜†2026β†’ Residue 145
NM_007194.4(CHEK2):c.232C>T (p.Gln78Ter)Pathogenic
not provided|Familial cancer of breast|Hereditary cancer-predisposing syndrome|CHEK2-related cancer predisposition
β˜…β˜…β˜†β˜†2026β†’ Residue 78
NM_007194.4(CHEK2):c.277del (p.Trp93fs)Pathogenic
Hereditary cancer-predisposing syndrome|Familial cancer of breast|not provided|CHEK2-related cancer predisposition|Hereditary breast ovarian cancer syndrome|Breast-ovarian cancer, familial, susceptibility to, 1|Predisposition to cancer
β˜…β˜…β˜†β˜†2026β†’ Residue 93
NM_007194.4(CHEK2):c.592+3A>TPathogenic
Hereditary cancer-predisposing syndrome|Familial cancer of breast|not provided|Familial cancer of breast;CHEK2-related cancer predisposition|Breast carcinoma|Hereditary breast ovarian cancer syndrome|Prostate cancer|CHEK2-related disorder|Malignant tumor of breast|CHEK2-related cancer predisposition;Bone osteosarcoma;Familial prostate cancer|CHEK2-related cancer predisposition|Breast-ovarian cancer, familial, susceptibility to, 1
β˜…β˜…β˜†β˜†2026
NM_007194.4(CHEK2):c.616_617del (p.Val206fs)Pathogenic
Familial cancer of breast|Hereditary cancer-predisposing syndrome|not provided|not specified|Hereditary breast ovarian cancer syndrome
β˜…β˜…β˜†β˜†2026β†’ Residue 206
NM_007194.4(CHEK2):c.707T>C (p.Leu236Pro)Likely pathogenic
Hereditary cancer-predisposing syndrome|Familial cancer of breast|Hereditary breast ovarian cancer syndrome|not provided|Familial cancer of breast;Hereditary breast ovarian cancer syndrome;CHEK2-related cancer predisposition|Predisposition to cancer|CHEK2-related cancer predisposition|CHEK2-related disorder|Bone osteosarcoma;Familial prostate cancer;CHEK2-related cancer predisposition
β˜…β˜…β˜†β˜†2026β†’ Residue 236
NM_007194.4(CHEK2):c.58C>T (p.Gln20Ter)Pathogenic
not specified|not provided|Familial cancer of breast|Hereditary cancer-predisposing syndrome|Familial ovarian cancer|Breast carcinoma|CHEK2-related cancer predisposition|Inherited breast cancer and ovarian cancer|CHEK2-related cancer predisposition;Familial cancer of breast;Familial prostate cancer;Bone osteosarcoma
β˜…β˜…β˜†β˜†2026β†’ Residue 20
NM_007194.4(CHEK2):c.919_920del (p.Gly307fs)Pathogenic
Familial cancer of breast|Hereditary cancer-predisposing syndrome
β˜…β˜…β˜†β˜†2026β†’ Residue 307
NM_007194.4(CHEK2):c.591del (p.Val198fs)Pathogenic
Hereditary cancer-predisposing syndrome|Familial cancer of breast|not provided|Hereditary breast ovarian cancer syndrome|Malignant tumor of breast|Familial cancer of breast;Colorectal cancer;Prostate cancer|Breast and/or ovarian cancer|CHEK2-related disorder|Inherited breast cancer and ovarian cancer|Childhood neoplasm
β˜…β˜…β˜†β˜†2026β†’ Residue 198
NM_007194.4(CHEK2):c.499G>A (p.Gly167Arg)Pathogenic
Hereditary cancer-predisposing syndrome|Breast and colorectal cancer, susceptibility to|not provided|Familial cancer of breast|Breast carcinoma|Predisposition to cancer|Malignant tumor of breast|CHEK2-related cancer predisposition|Hereditary breast ovarian cancer syndrome|CHEK2-related cancer predisposition;Bone osteosarcoma;Familial prostate cancer|Hereditary nonpolyposis colon cancer
β˜…β˜…β˜†β˜†2026β†’ Residue 167
NM_007194.4(CHEK2):c.715G>T (p.Glu239Ter)Pathogenic
Hereditary cancer-predisposing syndrome|not provided|Familial cancer of breast|Colorectal cancer|Prostate cancer
β˜…β˜…β˜†β˜†2026β†’ Residue 239
NM_007194.4(CHEK2):c.1555C>T (p.Arg519Ter)Pathogenic
Hereditary cancer-predisposing syndrome|Breast and colorectal cancer, susceptibility to|not provided|Familial cancer of breast|Hereditary breast ovarian cancer syndrome|CHEK2-related cancer predisposition|Breast and/or ovarian cancer|Gastric cancer|Familial cancer of breast;Familial prostate cancer|Bone osteosarcoma;Familial prostate cancer;CHEK2-related cancer predisposition
β˜…β˜…β˜†β˜†2026β†’ Residue 519
NM_007194.4(CHEK2):c.1502_1503dup (p.Glu502fs)Pathogenic
Hereditary cancer-predisposing syndrome|Familial cancer of breast
β˜…β˜…β˜†β˜†2026β†’ Residue 502
NM_007194.4(CHEK2):c.444+1G>APathogenic
Hereditary cancer-predisposing syndrome|Breast and colorectal cancer, susceptibility to|Familial cancer of breast|not provided|Breast cancer, susceptibility to|Familial cancer of breast;Bone osteosarcoma;CHEK2-related cancer predisposition;Prostate cancer|Familial cancer of breast;CHEK2-related cancer predisposition|Breast and/or ovarian cancer|Malignant tumor of breast|CHEK2-related cancer predisposition|Breast carcinoma|Colorectal cancer|Melanoma|Endometrial carcinoma|CHEK2-related disorder|TUMOR PREDISPOSITION SYNDROME 4, BREAST/PROSTATE|Bone osteosarcoma;Familial prostate cancer;CHEK2-related cancer predisposition|Breast-ovarian cancer, familial, susceptibility to, 1|Inherited breast cancer and ovarian cancer|Malignant tumor of urinary bladder|Hereditary breast ovarian cancer syndrome
β˜…β˜…β˜†β˜†2026
NM_007194.4(CHEK2):c.1279_1280insC (p.Phe427fs)Pathogenic
Familial cancer of breast|Hereditary cancer-predisposing syndrome
β˜…β˜…β˜†β˜†2026β†’ Residue 427
View on ClinVar β†—
Drug Targets2
PREXASERTIBPhase II
Serine/threonine-protein kinase Chk1 inhibitor
ovarian cancer
XL-844Phase I
Serine/threonine-protein kinase Chk2 inhibitor
Related Genes
EXO1Protein interaction100%MDM2Protein interaction98%MDM4Protein interaction98%PPM1DProtein interaction98%ATMINProtein interaction98%FANCD2Protein interaction97%
Tissue Expression6 tissues
Bone Marrow
100%
Ovary
40%
Liver
26%
Lung
24%
Brain
21%
Heart
9%
Gene Interaction Network
Click a node to explore
CHEK2EXO1MDM2MDM4PPM1DATMINFANCD2
PROTEIN STRUCTURE
Preparing viewer…
PDB3VA4 Β· 1.54 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
1.40LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF1.07 [0.82–1.40]
RankingsWhere CHEK2 stands among ~20K protein-coding genes
  • #311of 20,598
    Most Researched690 Β· top 5%
  • #31of 5,498
    Most Pathogenic Variants1,069 Β· top 1%
  • #14,494of 17,882
    Most Constrained (LOEUF)1.40
Genes detectedCHEK2
Sources retrieved50 papers
Response timeβ€”
πŸ“„ Sources
50β–Ό
1
Rare, protein-truncating variants in
PMID: 28779002
J Med Genet Β· 2017
1.00
2
Management of individuals with germline pathogenic/likely pathogenic variants in CHEK2: A clinical practice resource of the American College of Medical Genetics and Genomics (ACMG).
PMID: 37490054
Genet Med Β· 2023
0.90
3
A missense variant effect map for the human tumor-suppressor protein CHK2.
PMID: 39642869
Am J Hum Genet Β· 2024
0.82
4
Systematic Minigene-Based Splicing Analysis and Tentative Clinical Classification of 52 CHEK2 Splice-Site Variants.
PMID: 37725924
Clin Chem Β· 2024
0.80
5
CHEK2 variants: linking functional impact to cancer risk.
PMID: 35643632
Trends Cancer Β· 2022
0.80