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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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CHMP2A
charged multivesicular body protein 2A
Chromosome 19 · 19q13.43
NCBI Gene: 27243Ensembl: ENSG00000130724.10HGNC: HGNC:30216UniProt: M0R1T5
101PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
kinetochore microtubuleprotein domain specific bindingphosphatidylcholine bindingmembrane bending activityneurodegenerative diseaseHIV infectionviral diseasesevere acute respiratory syndrome
✦AI Summary

CHMP2A is a core component of the ESCRT-III complex that mediates membrane remodeling across multiple cellular processes. Primary function involves membrane fission and cytokinetic abscission, where CHMP2A assembles into helical filaments with CHMP3 to constrict and cleave membranes 1. CHMP2A also functions in autophagosome closure, partnering with ATG9A through IQGAP1 to facilitate the final stages of autophagosome biogenesis 2. Mechanistically, CHMP2A exhibits ordered hierarchical assembly with other ESCRT-III isoforms—its depletion causes mislocalization of CHMP4B, CHMP3, and CHMP1B while minimally affecting IST1 and CHMP2B 3. Unlike CHMP2B, CHMP2A requires CHMP3 for membrane binding and induces no significant membrane rigidification 4. Disease relevance includes intellectual disability, where de novo CHMP2A mutations were identified in moderate-to-severe cases 5, and cancer immunotherapy resistance. CHMP2A deletion enhances tumor sensitivity to natural killer cell-mediated cytotoxicity by activating NF-κB signaling and reducing immunosuppressive extracellular vesicle secretion 67. Clinically, CHMP2A inhibition represents a potential strategy to improve NK cell-based immunotherapy outcomes. Additionally, CHMP2A expression is associated with preserved autophagy during cisplatin-induced kidney injury 8.

Sources cited
1
CHMP2A-CHMP3 heterodimers form helical filaments that constrict and cleave negatively curved membranes via VPS4-mediated remodeling
PMID: 36604498
2
CHMP2A partners with ATG9A through IQGAP1 to facilitate autophagosome closure in the final stage of autophagosome biogenesis
PMID: 40241347
3
CHMP2A is essential for ordered assembly of ESCRT-III subunits during cytokinetic abscission; its depletion causes hierarchical mislocalization of other ESCRT-III components
PMID: 40928930
4
CHMP2A requires CHMP3 for membrane binding, unlike CHMP2B, and induces no significant membrane rigidification
PMID: 33832485
5
De novo CHMP2A mutations identified as possibly pathogenic in moderate-to-severe intellectual disability cases
PMID: 25356899
6
CHMP2A deletion reduces tumor resistance to NK cell-mediated cytotoxicity by decreasing immunosuppressive extracellular vesicle secretion
PMID: 35393416
7
CHMP2A deletion enhances both NK cell and T cell-mediated antitumor activity in immunocompetent models and increases immune cell infiltration
PMID: 38702144
8
CHMP2A expression is associated with preserved autophagy during cisplatin-induced acute kidney injury
PMID: 40164578
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.53Moderate
HIV infectionOpen Targets
0.46Moderate
viral diseaseOpen Targets
0.46Moderate
COVID-19Open Targets
0.37Weak
severe acute respiratory syndromeOpen Targets
0.37Weak
intelligenceOpen Targets
0.13Weak
attention deficit hyperactivity disorderOpen Targets
0.11Weak
autism spectrum disorderOpen Targets
0.10Weak
mathematical abilityOpen Targets
0.10Suggestive
hypertensionOpen Targets
0.09Suggestive
response to xenobiotic stimulusOpen Targets
0.09Suggestive
neoplasmOpen Targets
0.07Suggestive
head and neck squamous cell carcinomaOpen Targets
0.06Suggestive
lung adenocarcinomaOpen Targets
0.05Suggestive
uterine fibroidOpen Targets
0.04Suggestive
Alzheimer diseaseOpen Targets
0.03Suggestive
hepatocellular carcinomaOpen Targets
0.03Suggestive
glioblastoma multiformeOpen Targets
0.02Suggestive
breast cancerOpen Targets
0.02Suggestive
serous adenocarcinomaOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
ENTPD2Protein interaction100%STAMBPProtein interaction100%TSG101Protein interaction100%STAMProtein interaction100%HGSProtein interaction100%IST1Protein interaction100%
Tissue Expression6 tissues
Heart
100%
Lung
99%
Liver
97%
Brain
92%
Bone Marrow
68%
Ovary
68%
Gene Interaction Network
Click a node to explore
CHMP2AENTPD2STAMBPTSG101STAMHGSIST1
PROTEIN STRUCTURE
Preparing viewer…
PDB7ZCG · 3.30 Å · EM
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.51Moderately Constrained
pLIⓘ
0.97Intolerant
Observed/Expected LoF0.26 [0.14–0.51]
RankingsWhere CHMP2A stands among ~20K protein-coding genes
  • #4,711of 20,598
    Most Researched101 · top quartile
  • #3,088of 17,882
    Most Constrained (LOEUF)0.51 · top quartile
Genes detectedCHMP2A
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
De novo mutations in moderate or severe intellectual disability.
PMID: 25356899
PLoS Genet · 2014
1.00
2
CHMP2A regulates tumor sensitivity to natural killer cell-mediated cytotoxicity.
PMID: 35393416
Nat Commun · 2022
0.90
3
ATG9A controls all stages of autophagosome biogenesis.
PMID: 40241347
Autophagy · 2025
0.80
4
SET8 inhibition preserves PTEN to attenuate kidney cell apoptosis in cisplatin nephrotoxicity.
PMID: 40164578
Cell Death Dis · 2025
0.70
5
Structural basis of CHMP2A-CHMP3 ESCRT-III polymer assembly and membrane cleavage.
PMID: 36604498
Nat Struct Mol Biol · 2023
0.60