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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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CKAP2
cytoskeleton associated protein 2
Chromosome 13 · 13q14.3
NCBI Gene: 26586Ensembl: ENSG00000136108.16HGNC: HGNC:1990UniProt: Q8WWK9
102PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
ciliumciliary basal bodymitotic spindlemicrotubule cytoskeletonAbnormality of the breastBreast hypertrophyAbnormality of the skeletal systemAlzheimer disease
✦AI Summary

CKAP2 (cytoskeleton associated protein 2) is a microtubule-stabilizing protein that plays critical roles in cell cycle regulation, proliferation, and disease pathogenesis. The protein functions as a regulator of cellular senescence, with siRNA knockdown studies demonstrating that CKAP2 depletion induces senescence markers including p16/p21 activation and morphological changes characteristic of senescent cells 1. CKAP2 operates through multiple mechanisms including regulation of cell cycle progression, mitosis, and cellular proliferation 1. In colorectal cancer, CKAP2 is regulated by transcription factor TFDP1 and promotes tumor metastasis and proliferation by affecting the tumor microenvironment, including M2 macrophage polarization and angiogenesis 2. The protein shows significant disease relevance across multiple conditions. In rheumatoid arthritis, CKAP2 is highly expressed in synovial tissues and promotes proliferation, migration, and invasion of synovial cells through the IL-6/JAK/STAT3 pathway 3. Genome-wide association studies have identified CKAP2 as a susceptibility locus for irritable bowel syndrome 4. Clinically, CKAP2 demonstrates diagnostic and prognostic potential across several diseases, serving as a biomarker for rheumatoid arthritis 3, ARDS in elderly patients 5, and gastric cancer where elevated expression correlates with favorable prognosis 6.

Sources cited
1
CKAP2 knockdown induces cellular senescence markers including p16/p21 activation and morphological changes
PMID: 32264951
2
CKAP2 is regulated by TFDP1 and promotes colorectal cancer metastasis through tumor microenvironment modulation
PMID: 39403723
3
CKAP2 is highly expressed in rheumatoid arthritis synovial tissues and promotes cell proliferation through IL-6/JAK/STAT3 pathway
PMID: 40636121
4
CKAP2 identified as a genetic susceptibility locus for irritable bowel syndrome
PMID: 34741163
5
CKAP2 serves as a biomarker for ARDS in elderly patients
PMID: 38558817
6
Elevated CKAP2 expression correlates with favorable prognosis in gastric cancer
PMID: 40004022
Disease Associationsⓘ20
Abnormality of the breastOpen Targets
0.26Weak
Breast hypertrophyOpen Targets
0.26Weak
Abnormality of the skeletal systemOpen Targets
0.10Suggestive
Alzheimer diseaseOpen Targets
0.09Suggestive
neoplasmOpen Targets
0.09Suggestive
breast cancerOpen Targets
0.09Suggestive
hepatocellular carcinomaOpen Targets
0.08Suggestive
gastric cancerOpen Targets
0.08Suggestive
gliomaOpen Targets
0.08Suggestive
cervical carcinomaOpen Targets
0.07Suggestive
adult-onset autosomal dominant demyelinating leukodystrophyOpen Targets
0.07Suggestive
rheumatoid arthritisOpen Targets
0.07Suggestive
colorectal carcinomaOpen Targets
0.07Suggestive
cancerOpen Targets
0.04Suggestive
colorectal cancerOpen Targets
0.03Suggestive
osteosarcomaOpen Targets
0.03Suggestive
lung adenocarcinomaOpen Targets
0.03Suggestive
triple-negative breast cancerOpen Targets
0.03Suggestive
infectionOpen Targets
0.02Suggestive
proliferative diabetic retinopathyOpen Targets
0.02Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
CEP55Protein interaction100%KIF11Protein interaction100%ASPMProtein interaction99%BUB1Protein interaction99%BUB1BProtein interaction98%TOP2AProtein interaction98%
Tissue Expression6 tissues
Bone Marrow
100%
Brain
23%
Heart
9%
Lung
5%
Ovary
3%
Liver
3%
Gene Interaction Network
Click a node to explore
CKAP2CEP55KIF11ASPMBUB1BUB1BTOP2A
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q8WWK9
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.98LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.76 [0.58–0.98]
RankingsWhere CKAP2 stands among ~20K protein-coding genes
  • #4,672of 20,598
    Most Researched102 · top quartile
  • #9,386of 17,882
    Most Constrained (LOEUF)0.98
Genes detectedCKAP2
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Identification and validation of CKAP2 as a novel biomarker in the development and progression of rheumatoid arthritis.
PMID: 40636121
Front Immunol · 2025
1.00
2
A multidimensional systems biology analysis of cellular senescence in aging and disease.
PMID: 32264951
Genome Biol · 2020
0.90
3
Genome-wide analysis of 53,400 people with irritable bowel syndrome highlights shared genetic pathways with mood and anxiety disorders.
PMID: 34741163
Nat Genet · 2021
0.80
4
Structurally divergent and recurrently mutated regions of primate genomes.
PMID: 38428424
Cell · 2024
0.70
5
ARDS and aging: TYMS emerges as a promising biomarker and therapeutic target.
PMID: 38558817
Front Immunol · 2024
0.60