HomeAboutRankingsData Sources
© 2026 GeneE
🧬
GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
ⓘGeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
CLEC4E
C-type lectin domain family 4 member E
Chromosome 12 · 12p13.31
NCBI Gene: 26253Ensembl: ENSG00000166523.8HGNC: HGNC:14555UniProt: F5H5X7
44PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
pattern recognition receptor signaling pathwayprotein bindingcalcium ion bindingpattern recognition receptor activitybenign neoplasminfectionpsoriasisexperimental autoimmune encephalomyelitis
✦AI Summary

CLEC4E (Mincle) is a calcium-dependent C-type lectin pattern recognition receptor that recognizes both pathogen-associated molecular patterns (PAMPs) and damage-associated molecular patterns (DAMPs) 12. Its primary ligand is mycobacterial trehalose 6,6'-dimycolate (TDM), a potent immunomodulatory cell wall glycolipid that triggers SYK/CARD9/NF-κB signaling through FCER1G-mediated ITAM phosphorylation, driving T-helper 1 and T-helper 17 cell differentiation 23. CLEC4E also recognizes fungal α-mannose residues and senses DAMPs from damaged cells, promoting macrophage activation and inflammatory responses 1. Functionally, CLEC4E mediates trained immunity in bone marrow progenitors following microbiota translocation 4 and is differentially expressed in acute lung injury models 5. In tuberculosis, CLEC4E polymorphisms (rs10841845, rs10841847) confer protective genetic associations in Chinese populations 6, though one study found no conclusive associations 7. Pathologically, high CLEC4E expression in tumor-associated macrophages correlates with poor melanoma prognosis; CLEC4E knockout suppresses tumor growth by reducing TAM proliferation and enhancing T-cell cytotoxicity 8. CLEC4E is elevated in systemic lupus erythematosus and ischemic stroke, serving as a diagnostic and prognostic biomarker 910. The miR-22-5p/CLEC4E axis is implicated in nonalcoholic fatty liver disease pathogenesis 11.

Sources cited
1
CLEC4E (Mincle) is a calcium-dependent C-type lectin pattern recognition receptor that recognizes both pathogen-associated molecular patterns (PAMPs) and damage-associated molecular patterns (DAMPs) , .
PMID: 18509109
2
Functionally, CLEC4E mediates trained immunity in bone marrow progenitors following microbiota translocation and is differentially expressed in acute lung injury models .
PMID: 39848243
3
Functionally, CLEC4E mediates trained immunity in bone marrow progenitors following microbiota translocation and is differentially expressed in acute lung injury models .
PMID: 38745657
4
In tuberculosis, CLEC4E polymorphisms (rs10841845, rs10841847) confer protective genetic associations in Chinese populations , though one study found no conclusive associations .
PMID: 31075410
5
In tuberculosis, CLEC4E polymorphisms (rs10841845, rs10841847) confer protective genetic associations in Chinese populations , though one study found no conclusive associations .
PMID: 27363694
6
Pathologically, high CLEC4E expression in tumor-associated macrophages correlates with poor melanoma prognosis; CLEC4E knockout suppresses tumor growth by reducing TAM proliferation and enhancing T-cell cytotoxicity .
PMID: 41088887
7
The miR-22-5p/CLEC4E axis is implicated in nonalcoholic fatty liver disease pathogenesis .
PMID: 39978254
Disease Associationsⓘ20
benign neoplasmOpen Targets
0.14Weak
infectionOpen Targets
0.09Suggestive
psoriasisOpen Targets
0.09Suggestive
experimental autoimmune encephalomyelitisOpen Targets
0.08Suggestive
isolated agammaglobulinemiaOpen Targets
0.07Suggestive
acute kidney injuryOpen Targets
0.07Suggestive
combined immunodeficiency due to moesin deficiencyOpen Targets
0.06Suggestive
agammaglobulinemia 7, autosomal recessiveOpen Targets
0.06Suggestive
severe combined immunodeficiency due to CARD11 deficiencyOpen Targets
0.06Suggestive
immunodeficiency 18Open Targets
0.06Suggestive
neutropenia, severe congenital, 1, autosomal dominantOpen Targets
0.06Suggestive
combined immunodeficiency due to CTPS1 deficiencyOpen Targets
0.06Suggestive
Immunodeficiency due to interleukin-1 receptor-associated kinase-4 deficiencyOpen Targets
0.06Suggestive
autoimmune diseaseOpen Targets
0.06Suggestive
immunodeficiency 89 and autoimmunityOpen Targets
0.05Suggestive
neoplasmOpen Targets
0.05Suggestive
Immunodeficiency by defective expression of HLA class 2Open Targets
0.05Suggestive
agammaglobulinemia 8, autosomal dominantOpen Targets
0.05Suggestive
gastric cancerOpen Targets
0.05Suggestive
immunodeficiency 112Open Targets
0.05Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
CLEC4DProtein interaction99%IL1BProtein interaction97%SF3B3Protein interaction95%FCER1GProtein interaction93%SYKProtein interaction93%TYROBPProtein interaction93%
Tissue Expression6 tissues
Lung
100%
Bone Marrow
93%
Brain
17%
Liver
6%
Heart
3%
Ovary
3%
Gene Interaction Network
Click a node to explore
CLEC4ECLEC4DIL1BSF3B3FCER1GSYKTYROBP
PROTEIN STRUCTURE
Preparing viewer…
PDB3WH2 · 1.30 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.51LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.91 [0.57–1.51]
RankingsWhere CLEC4E stands among ~20K protein-coding genes
  • #9,572of 20,598
    Most Researched44
  • #15,203of 17,882
    Most Constrained (LOEUF)1.51
Genes detectedCLEC4E
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Microbiota translocation following intestinal barrier disruption promotes Mincle-mediated training of myeloid progenitors in the bone marrow.
PMID: 39848243
Immunity · 2025
1.00
2
Heterogeneity of immune cells and their communications unveiled by transcriptome profiling in acute inflammatory lung injury.
PMID: 38745657
Front Immunol · 2024
0.90
3
Association between CLEC4E gene polymorphism of mincle and pulmonary tuberculosis infection in a northern Chinese population.
PMID: 31075410
Gene · 2019
0.80
4
Targeting CLEC4E in immunosuppressive tumour-associated macrophages via BET inhibition.
PMID: 41088887
Clin Transl Med · 2025
0.70
5
Polymorphisms in the Pattern Recognition Receptor Mincle Gene (CLEC4E) and Association with Tuberculosis.
PMID: 27363694
Lung · 2016
0.60