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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
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COL11A2
collagen type XI alpha 2 chain
Chromosome 6 Β· 6p21.32
NCBI Gene: 1302Ensembl: ENSG00000204248.12HGNC: HGNC:2187UniProt: A0A0C4DFS1
85PubMed Papers
5Diseases
0Drugs
197Pathogenic Variants
RESEARCH IMPACT
Variant-Rich
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
sensory perception of soundprotein bindingextracellular matrix structural constituent conferring tensile strengthskeletal system developmentOtospondylomegaepiphyseal dysplasia, autosomal dominantOtospondylomegaepiphyseal dysplasia, autosomal recessiveDeafness, autosomal dominant, 13Deafness, autosomal recessive, 53
✦AI Summary

COL11A2 encodes the alpha-2 chain of collagen type XI, a fibrillar collagen essential for skeletal development and extracellular matrix organization. The protein plays a critical role in controlling lateral growth of collagen II fibrils during fibrillogenesis, contributing to the tensile strength of connective tissues 1. COL11A2 is expressed in cartilage and other tissues, functioning as a structural component of the extracellular matrix 2. Pathogenic COL11A2 variants cause hereditary connective tissue disorders with diverse phenotypes. Loss-of-function mutations underlie vertebral malformations and congenital scoliosis through disruption of vertebral development; zebrafish studies demonstrate that col11a2 mutations produce vertebral fusions due to mineralization across intervertebral segments, and patient-derived missense variants fail to rescue this phenotype 3. COL11A2 mutations are associated with non-syndromic hearing loss (4% of autosomal-dominant cases in Europe) 4, Stickler syndrome without ocular involvement 2, and skeletal dysplasias presenting with growth retardation 5. A COL11A2 genetic variant (rs1799907) shows significant association with rotator cuff tendinopathy in young athletes 6. Clinically, COL11A2 mutation detection via genetic testing aids in diagnosis of skeletal abnormalities and hearing impairment, enabling appropriate genetic counseling and management strategies for affected families 1, 7.

Sources cited
1
COL11A2 variants are classified using ACMG/AMP criteria for hereditary connective tissue disorders; supports genetic testing utility
PMID: 37079061
2
COL11A2 mutations cause vertebral malformations and congenital scoliosis; zebrafish models show loss-of-function produces vertebral fusions; patient variants fail to rescue phenotype
PMID: 37462524
3
COL11A2 mutations identified in prenatally diagnosed fetal structural anomalies; expands mutation spectrum
PMID: 37880672
4
COL11A2 mutations associated with short stature and skeletal abnormalities in children; collagen gene screening recommended for skeletal dysplasias
PMID: 35250876
5
COL11A2 mutations cause Stickler syndrome without ocular involvement; expressed in cartilage but not vitreous
PMID: 9091360
6
COL11A2 rs1799907 variant associated with rotator cuff tendinopathy in young athletes
PMID: 34009784
7
COL11A2 accounts for 4% of autosomal-dominant non-syndromic hearing loss cases in Europe
PMID: 35044523
Disease Associationsβ“˜5
Deafness, autosomal dominant, 13UniProt
Deafness, autosomal recessive, 53UniProt
Fibrochondrogenesis 2UniProt
Otospondylomegaepiphyseal dysplasia, autosomal dominantUniProt
Otospondylomegaepiphyseal dysplasia, autosomal recessiveUniProt
Pathogenic Variants197
NM_080680.3(COL11A2):c.3100C>T (p.Arg1034Cys)Pathogenic
Autosomal dominant nonsyndromic hearing loss 13|Rare genetic deafness|not provided|COL11A2-related disorder
β˜…β˜…β˜†β˜†2026β†’ Residue 1034
NM_080680.3(COL11A2):c.328C>T (p.Arg110Ter)Pathogenic
not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 110
NM_080680.3(COL11A2):c.4135C>T (p.Arg1379Ter)Pathogenic
Otospondylomegaepiphyseal dysplasia, autosomal dominant|Autosomal dominant nonsyndromic hearing loss 13|not provided|COL11A2-related disorder|Inborn genetic diseases
β˜…β˜…β˜†β˜†2025β†’ Residue 1379
NM_080680.3(COL11A2):c.2158C>T (p.Arg720Ter)Pathogenic
not provided|Monogenic hearing loss|Otospondylomegaepiphyseal dysplasia, autosomal dominant
β˜…β˜…β˜†β˜†2025β†’ Residue 720
NM_080680.3(COL11A2):c.1135C>T (p.Arg379Ter)Pathogenic
not provided|Otospondylomegaepiphyseal dysplasia, autosomal dominant
β˜…β˜…β˜†β˜†2025β†’ Residue 379
NM_080680.3(COL11A2):c.607-2A>TLikely pathogenic
COL11A2-related disorder|not provided
β˜…β˜…β˜†β˜†2025
NM_080680.3(COL11A2):c.1297C>T (p.Arg433Ter)Pathogenic
not provided|Autosomal dominant nonsyndromic hearing loss 13;Fibrochondrogenesis 2;Autosomal recessive nonsyndromic hearing loss 53;Otospondylomegaepiphyseal dysplasia, autosomal recessive;Otospondylomegaepiphyseal dysplasia, autosomal dominant
β˜…β˜…β˜†β˜†2025β†’ Residue 433
NM_080680.3(COL11A2):c.2843dup (p.Pro950fs)Likely pathogenic
not provided|Otospondylomegaepiphyseal dysplasia, autosomal dominant
β˜…β˜…β˜†β˜†2025β†’ Residue 950
NM_080680.3(COL11A2):c.4392+1G>APathogenic
Otospondylomegaepiphyseal dysplasia, autosomal dominant|not provided
β˜…β˜…β˜†β˜†2025
NM_080680.3(COL11A2):c.2554C>T (p.Arg852Ter)Pathogenic
not provided|COL11A2-related disorder
β˜…β˜…β˜†β˜†2025β†’ Residue 852
NM_080680.3(COL11A2):c.3991C>T (p.Arg1331Ter)Pathogenic
Otospondylomegaepiphyseal dysplasia, autosomal recessive|not provided|Otospondylomegaepiphyseal dysplasia, autosomal dominant;Otospondylomegaepiphyseal dysplasia, autosomal recessive;Autosomal dominant nonsyndromic hearing loss 13;Fibrochondrogenesis 2;Autosomal recessive nonsyndromic hearing loss 53
β˜…β˜…β˜†β˜†2025β†’ Residue 1331
NM_080680.3(COL11A2):c.3058C>T (p.Arg1020Ter)Pathogenic
not provided|Autosomal recessive nonsyndromic hearing loss 53;Autosomal dominant nonsyndromic hearing loss 13;Otospondylomegaepiphyseal dysplasia, autosomal dominant;Fibrochondrogenesis 2;Otospondylomegaepiphyseal dysplasia, autosomal recessive
β˜…β˜…β˜†β˜†2025β†’ Residue 1020
NM_080680.3(COL11A2):c.3181C>T (p.Arg1061Ter)Pathogenic
not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 1061
NM_080680.3(COL11A2):c.1719+3dupLikely pathogenic
not provided|Otospondylomegaepiphyseal dysplasia, autosomal dominant
β˜…β˜…β˜†β˜†2024
NM_080680.3(COL11A2):c.1819-2A>GLikely pathogenic
not provided|Autosomal dominant nonsyndromic hearing loss 13
β˜…β˜…β˜†β˜†2024
NM_080680.3(COL11A2):c.3958C>T (p.Arg1320Ter)Pathogenic
not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 1320
NM_080680.3(COL11A2):c.876+1G>ALikely pathogenic
not provided
β˜…β˜…β˜†β˜†2024
NM_080680.3(COL11A2):c.4798C>T (p.Arg1600Ter)Pathogenic
not provided|Fibrochondrogenesis 2;Otospondylomegaepiphyseal dysplasia, autosomal recessive;Otospondylomegaepiphyseal dysplasia, autosomal dominant;Autosomal dominant nonsyndromic hearing loss 13;Autosomal recessive nonsyndromic hearing loss 53
β˜…β˜…β˜†β˜†2024β†’ Residue 1600
NM_080680.3(COL11A2):c.1879C>T (p.Arg627Ter)Pathogenic
not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 627
NM_080680.3(COL11A2):c.3329dup (p.Gly1111fs)Pathogenic
not provided|Fibrochondrogenesis 2;Otospondylomegaepiphyseal dysplasia, autosomal recessive;Otospondylomegaepiphyseal dysplasia, autosomal dominant;Autosomal recessive nonsyndromic hearing loss 53;Autosomal dominant nonsyndromic hearing loss 13
β˜…β˜…β˜†β˜†2024β†’ Residue 1111
View on ClinVar β†—
Related Genes
SLC39A7Protein interaction94%PFDN6Protein interaction88%RPS18Protein interaction88%COL1A1Protein interaction87%COL6A3Protein interaction87%LHFPL5Protein interaction86%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
Click a node to explore
COL11A2SLC39A7PFDN6RPS18COL1A1COL6A3LHFPL5
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt P13942
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
0.50Moderately Constrained
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.43 [0.37–0.50]
RankingsWhere COL11A2 stands among ~20K protein-coding genes
  • #5,600of 20,598
    Most Researched85
  • #350of 5,498
    Most Pathogenic Variants197 Β· top 10%
  • #3,036of 17,882
    Most Constrained (LOEUF)0.50 Β· top quartile
Genes detectedCOL11A2
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
PMID: 20301479
1.00
2
Specifications and validation of the ACMG/AMP criteria for clinical interpretation of sequence variants in collagen genes associated with joint hypermobility.
PMID: 37079061
Hum Genet Β· 2023
0.90
3
COL11A2 as a candidate gene for vertebral malformations and congenital scoliosis.
PMID: 37462524
Hum Mol Genet Β· 2023
0.80
4
Prenatal whole-exome sequencing for fetal structural anomalies: a retrospective analysis of 145 Chinese cases.
PMID: 37880672
BMC Med Genomics Β· 2023
0.70
5
Clinical Characteristics of Short-Stature Patients With Collagen Gene Mutation and the Therapeutic Response to rhGH.
PMID: 35250876
Front Endocrinol (Lausanne) Β· 2022
0.60