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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
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COX6B1
cytochrome c oxidase subunit 6B1
Chromosome 19 Β· 19q13.12
NCBI Gene: 1340Ensembl: ENSG00000126267.12HGNC: HGNC:2280UniProt: P14854
66PubMed Papers
21Diseases
0Drugs
2Pathogenic Variants
FUNCTIONAL ROLE
Hub Gene
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
substantia nigra developmentmitochondrionmitochondrial membranemitochondrial inner membranemitochondrial complex IV deficiency, nuclear type 7Isolated cytochrome C oxidase deficiencyleigh syndrome due to mitochondrial complex iv deficiencyneurodegenerative disease
✦AI Summary

COX6B1 encodes a nuclear-encoded subunit of cytochrome c oxidase (complex IV), the terminal enzyme in the mitochondrial electron transport chain that catalyzes oxygen reduction to water during oxidative phosphorylation 1. Despite being classified as a late incorporation subunit, COX6B1 is essential for both redox-sensitive early assembly steps and late stabilization of complex IV, with knockout cells showing complete loss of complex IV 1. The protein is located in the intermembrane space-facing region of complex IV and is indispensable for proper respiratory chain function 1. Pathogenic mutations in COX6B1 cause mitochondrial complex IV deficiency, manifesting as encephalomyopathy, hydrocephalus, and hypertrophic cardiomyopathy, with severely reduced or undetectable COX activity in patient tissues 2. COX6B1 expression is significantly downregulated in Alzheimer's disease patients and correlates with disease pathology 3. The gene shows disease associations across multiple conditions, including potential roles in lung adenocarcinoma where it may be regulated by miR-30b-3p 4, and involvement in pemphigus vulgaris through oxidative phosphorylation pathway activation 5. These findings highlight COX6B1's critical role in mitochondrial bioenergetics and its clinical significance in various pathological conditions.

Sources cited
1
COX6B1 is essential for both early assembly and late stabilization of complex IV, located in intermembrane space-facing region
PMID: 41419202
2
Pathogenic COX6B1 mutations cause mitochondrial complex IV deficiency with encephalomyopathy, hydrocephalus and cardiomyopathy
PMID: 24781756
3
COX6B1 is downregulated in Alzheimer's disease and associated variants affect mRNA levels
PMID: 30054583
4
COX6B1 may be regulated by miR-30b-3p in lung adenocarcinoma
PMID: 36002193
5
COX6B1 involvement in pemphigus vulgaris through oxidative phosphorylation pathway activation
PMID: 39373252
Disease Associationsβ“˜21
mitochondrial complex IV deficiency, nuclear type 7Open Targets
0.75Strong
Isolated cytochrome C oxidase deficiencyOpen Targets
0.57Moderate
leigh syndrome due to mitochondrial complex iv deficiencyOpen Targets
0.57Moderate
neurodegenerative diseaseOpen Targets
0.56Moderate
mitochondrial diseaseOpen Targets
0.37Weak
genetic disorderOpen Targets
0.18Weak
Isolated anophthalmia - microphthalmiaOpen Targets
0.06Suggestive
microphthalmiaOpen Targets
0.06Suggestive
isolated microphthalmia 7Open Targets
0.05Suggestive
nanophthalmiaOpen Targets
0.05Suggestive
nanophthalmos 2Open Targets
0.05Suggestive
neuropathyOpen Targets
0.05Suggestive
catecholaminergic polymorphic ventricular tachycardiaOpen Targets
0.05Suggestive
Microphthalmia - ankyloblepharon - intellectual disabilityOpen Targets
0.04Suggestive
Familial short QT syndromeOpen Targets
0.04Suggestive
catecholaminergic polymorphic ventricular tachycardia 1Open Targets
0.04Suggestive
Brugada syndromeOpen Targets
0.04Suggestive
atrial conduction diseaseOpen Targets
0.03Suggestive
catecholaminergic polymorphic ventricular tachycardia 4Open Targets
0.03Suggestive
long QT syndrome 15Open Targets
0.03Suggestive
Mitochondrial complex IV deficiency, nuclear type 7UniProt
Pathogenic Variants2
NM_001863.5(COX6B1):c.59G>A (p.Arg20His)Likely pathogenic
Mitochondrial complex IV deficiency, nuclear type 1|Mitochondrial complex IV deficiency, nuclear type 7
β˜…β˜†β˜†β˜†2024β†’ Residue 20
NM_001863.5(COX6B1):c.58C>T (p.Arg20Cys)Likely pathogenic
Mitochondrial complex IV deficiency, nuclear type 1
β˜…β˜†β˜†β˜†2019β†’ Residue 20
View on ClinVar β†—
Related Genes
NDUFA13Protein interaction100%NDUFC2Protein interaction100%NDUFS1Protein interaction100%NDUFV2Protein interaction100%NDUFA5Protein interaction100%NDUFB8Protein interaction100%
Tissue Expression6 tissues
Heart
100%
Liver
35%
Brain
30%
Bone Marrow
23%
Lung
23%
Ovary
17%
Gene Interaction Network
Click a node to explore
COX6B1NDUFA13NDUFC2NDUFS1NDUFV2NDUFA5NDUFB8
PROTEIN STRUCTURE
Preparing viewer…
PDB5Z62 Β· 3.60 Γ… Β· EM
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.42Moderately Constrained
pLIβ“˜
0.99Intolerant
Observed/Expected LoF0.13 [0.05–0.42]
RankingsWhere COX6B1 stands among ~20K protein-coding genes
  • #7,050of 20,598
    Most Researched66
  • #4,389of 5,498
    Most Pathogenic Variants2
  • #2,226of 17,882
    Most Constrained (LOEUF)0.42 Β· top quartile
Genes detectedCOX6B1
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Revealing Causal Protein Biomarkers and Potential Therapeutic Targets for Histologic-Specific Lung Cancer.
PMID: 41340014
J Cell Mol Med Β· 2025
1.00
2
The cytochrome c oxidase subunit COX6B1 is required for redox-sensitive early assembly and late stabilization of complex IV.
PMID: 41419202
J Biol Chem Β· 2026
0.90
3
Proteomic Analysis Reveals Oxidative Phosphorylation and JAK-STAT Pathways Mediated Pathogenesis of Pemphigus Vulgaris.
PMID: 39373252
Exp Dermatol Β· 2024
0.80
4
Microarray based gene expression analysis of murine brown and subcutaneous adipose tissue: significance with human.
PMID: 26010905
PLoS One Β· 2015
0.70
5
Mitochondrial complex IV deficiency, caused by mutated COX6B1, is associated with encephalomyopathy, hydrocephalus and cardiomyopathy.
PMID: 24781756
Eur J Hum Genet Β· 2015
0.60