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26 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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CSNK1A1
casein kinase 1 alpha 1
Chromosome 5 · 5q32
NCBI Gene: 1452Ensembl: ENSG00000113712.19HGNC: HGNC:2451UniProt: B4DER9
303PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Highly ConstrainedHub GeneKinase
RESEARCH IMPACT
Trending
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingcentrosomecellular response to nutrientpositive regulation of proteasomal ubiquitin-dependent protein catabolic processcancerneurodegenerative diseaseAlzheimer diseaseParkinson disease
✦AI Summary

CSNK1A1 (casein kinase 1 alpha 1) is a serine/threonine protein kinase that functions as a multifunctional regulator of cellular signaling and autophagy. As a casein kinase, CSNK1A1 phosphorylates diverse protein substrates and participates in Wnt signaling by phosphorylating CTNNB1 at serine-45 1. Beyond canonical Wnt regulation, CSNK1A1 serves critical roles in immune homeostasis and autophagy: it suppresses autoimmunity by promoting autophagic degradation of STING1 through phosphorylation of SQSTM1/p62, thereby restraining cGAS-STING1 signaling and type I interferon production 2. CSNK1A1 also regulates autophagosome maturation by phosphorylating UVRAG at serine-522, disrupting its interaction with SMURF1 and modulating autophagy flux 3. Disease relevance extends to hematologic malignancies: haploinsufficiency of Csnk1a1 cooperates with p53 loss to promote acute leukemic transformation through MAPK and Myc upregulation in del(5q) myelodysplastic syndrome 4. In hepatocellular carcinoma, ITGB5 upregulates CSNK1A1, which phosphorylates ITGB5 to enhance EGFR signaling and confer sorafenib resistance 5. Additionally, CSNK1A1 deletion drives WNT-dependent intestinal tumorigenesis 6. CSNK1A1 mutations occur frequently in adult T-cell leukemia/lymphoma associated with HTLV-1 infection 7. Pharmacological modulation of CSNK1A1 through selective agonists or inhibitors represents a therapeutic strategy for autoimmune diseases and hematologic malignancies.

Sources cited
1
CSNK1A1 participates in Wnt signaling and phosphorylates CTNNB1 at serine-45
PMID: 11955436
2
CSNK1A1 suppresses autoimmunity by promoting autophagic degradation of STING1 via phosphorylation of SQSTM1/p62
PMID: 37723657
3
CSNK1A1 phosphorylates UVRAG at serine-522 to regulate autophagosome maturation
PMID: 30686098
4
CSNK1A1 haploinsufficiency cooperates with p53 loss to promote acute leukemic transformation through MAPK and Myc upregulation
PMID: 38147624
5
ITGB5 upregulates CSNK1A1, which phosphorylates ITGB5 to enhance EGFR signaling and confer sorafenib resistance in HCC
PMID: 37149115
6
CSNK1A1 deletion drives WNT-dependent intestinal tumorigenesis
PMID: 32728212
7
CSNK1A1 mutations occur frequently in adult T-cell leukemia/lymphoma associated with HTLV-1 infection
PMID: 26437031
Disease Associationsⓘ20
cancerOpen Targets
0.55Moderate
neurodegenerative diseaseOpen Targets
0.52Moderate
Alzheimer diseaseOpen Targets
0.50Moderate
Parkinson diseaseOpen Targets
0.50Moderate
lysosomal storage diseaseOpen Targets
0.50Moderate
multiple sclerosisOpen Targets
0.50Moderate
neuroinflammatory disorderOpen Targets
0.37Weak
chronic myelogenous leukemiaOpen Targets
0.37Weak
COVID-19Open Targets
0.37Weak
actinic keratosisOpen Targets
0.23Weak
esophageal carcinomaOpen Targets
0.11Weak
Miyoshi myopathyOpen Targets
0.10Weak
neoplasmOpen Targets
0.10Weak
gliomaOpen Targets
0.10Suggestive
colorectal carcinomaOpen Targets
0.09Suggestive
acute myeloid leukemiaOpen Targets
0.08Suggestive
osteosarcomaOpen Targets
0.08Suggestive
melanomaOpen Targets
0.08Suggestive
insomniaOpen Targets
0.08Suggestive
Mantle cell lymphomaOpen Targets
0.08Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
RRP12Protein interaction100%RPS6Protein interaction100%PNO1Protein interaction100%LTV1Protein interaction100%MDM4Protein interaction100%TP53Protein interaction100%
Tissue Expression6 tissues
Heart
100%
Bone Marrow
93%
Brain
66%
Lung
63%
Ovary
42%
Liver
30%
Gene Interaction Network
Click a node to explore
CSNK1A1RRP12RPS6PNO1LTV1MDM4TP53
PROTEIN STRUCTURE
Preparing viewer…
PDB6GZD · 2.28 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.34Highly Constrained
pLIⓘ
1.00Intolerant
Observed/Expected LoF0.16 [0.08–0.34]
RankingsWhere CSNK1A1 stands among ~20K protein-coding genes
  • #1,146of 20,598
    Most Researched303 · top 10%
  • #1,460of 17,882
    Most Constrained (LOEUF)0.34 · top 10%
Genes detectedCSNK1A1
Sources retrieved26 papers
Response time—
📄 Sources
26▼
1
Integrated molecular analysis of adult T cell leukemia/lymphoma.
PMID: 26437031
Nat Genet · 2015
1.00
2
CSNK1A1/CK1α suppresses autoimmunity by restraining the CGAS-STING1 signaling.
PMID: 37723657
Autophagy · 2024
0.90
3
Ubiquitination of UVRAG by SMURF1 promotes autophagosome maturation and inhibits hepatocellular carcinoma growth.
PMID: 30686098
Autophagy · 2019
0.80
4
Collaborative effect of Csnk1a1 haploinsufficiency and mutant p53 in Myc induction can promote leukemic transformation.
PMID: 38147624
Blood Adv · 2024
0.70
5
Genetic abnormalities and pathophysiology of MDS.
PMID: 31093808
Int J Clin Oncol · 2019
0.68