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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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EDC4
enhancer of mRNA decapping 4
Chromosome 16 · 16q22.1
NCBI Gene: 23644Ensembl: ENSG00000038358.16HGNC: HGNC:17157UniProt: A0A8B0RAT7
147PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingP-bodynucleusnucleoplasmneurodegenerative diseaselysosomal storage diseaseoral cavity carcinomahepatocellular carcinoma
✦AI Summary

EDC4 (enhancer of mRNA decapping 4) is a large scaffold protein that orchestrates mRNA decay through multiple interconnected mechanisms. Functionally, EDC4 serves as a central hub organizing the mRNA decapping complex by promoting assembly between DCP1A and DCP2, while enhancing DCP2 catalytic activity 1. EDC4 also recruits the 5'-3' exonuclease XRN1, and the EDC4-XRN1 interaction critically regulates P-body dynamics to coordinate decapping with downstream mRNA degradation 2. The C-terminal domain (residues 1266-1401) drives phase separation and P-body formation through self-association 3. Beyond mRNA decay, EDC4 has unexpected roles in DNA repair and disease pathology. EDC4 functions as a member of the BRCA1-BRIP1-TOPBP1 complex, stimulating end resection at double-strand breaks; EDC4 deficiency phenocopies BRCA1 loss and increases sensitivity to PARP inhibitors 4. In Parkinson's disease, pathological alpha-synuclein accumulation aberrantly interacts with EDC4, disrupting normal decapping-module interactions and dysregulating mRNA decay in disease-relevant pathways 1. EDC4 regulation involves mTORC1-mediated phosphorylation affecting its protein expression and complex interactions 5. Additionally, viral pathogens exploit EDC4; Ebola virus VP35 binds EDC4 to hijack the decapping complex for viral RNA synthesis 6. These findings establish EDC4 as a multifunctional scaffold integrating mRNA metabolism with genome maintenance and disease pathogenesis.

Sources cited
1
Functionally, EDC4 serves as a central hub organizing the mRNA decapping complex by promoting assembly between DCP1A and DCP2, while enhancing DCP2 catalytic activity .
PMID: 35688132
2
EDC4 also recruits the 5'-3' exonuclease XRN1, and the EDC4-XRN1 interaction critically regulates P-body dynamics to coordinate decapping with downstream mRNA degradation .
PMID: 37621215
3
The C-terminal domain (residues 1266-1401) drives phase separation and P-body formation through self-association .
PMID: 40360209
4
EDC4 functions as a member of the BRCA1-BRIP1-TOPBP1 complex, stimulating end resection at double-strand breaks; EDC4 deficiency phenocopies BRCA1 loss and increases sensitivity to PARP inhibitors .
PMID: 29511213
5
EDC4 regulation involves mTORC1-mediated phosphorylation affecting its protein expression and complex interactions .
PMID: 25514416
6
Additionally, viral pathogens exploit EDC4; Ebola virus VP35 binds EDC4 to hijack the decapping complex for viral RNA synthesis .
PMID: 41006235
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.54Moderate
lysosomal storage diseaseOpen Targets
0.36Weak
oral cavity carcinomaOpen Targets
0.16Weak
hepatocellular carcinomaOpen Targets
0.06Suggestive
cervical cancerOpen Targets
0.05Suggestive
hypertensionOpen Targets
0.05Suggestive
primary familial polycythemia due to EPO receptor mutationOpen Targets
0.05Suggestive
breast cancerOpen Targets
0.04Suggestive
Pyruvate kinase hyperactivityOpen Targets
0.04Suggestive
Blackfan-Diamond anemiaOpen Targets
0.04Suggestive
hemolytic anemia due to diphosphoglycerate mutase deficiencyOpen Targets
0.04Suggestive
erythrocytosis, familial, 6Open Targets
0.04Suggestive
Abnormality of the skeletal systemOpen Targets
0.04Suggestive
erythrocytosis, familial, 3Open Targets
0.04Suggestive
physical activityOpen Targets
0.04Suggestive
metabolic syndromeOpen Targets
0.03Suggestive
erythrocytosis, familial, 4Open Targets
0.03Suggestive
infectionOpen Targets
0.03Suggestive
goutOpen Targets
0.02Suggestive
neoplasmOpen Targets
0.02Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
TNRC6AProtein interaction100%LSM2Protein interaction100%LSM4Protein interaction100%LSM1Protein interaction100%DCP1BProtein interaction100%SMG5Protein interaction100%
Tissue Expression6 tissues
Bone Marrow
100%
Ovary
73%
Lung
57%
Liver
41%
Heart
36%
Brain
35%
Gene Interaction Network
Click a node to explore
EDC4TNRC6ALSM2LSM4LSM1DCP1BSMG5
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q6P2E9
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.49Moderately Constrained
pLIⓘ
0.59Intermediate
Observed/Expected LoF0.40 [0.33–0.49]
RankingsWhere EDC4 stands among ~20K protein-coding genes
  • #3,085of 20,598
    Most Researched147 · top quartile
  • #2,926of 17,882
    Most Constrained (LOEUF)0.49 · top quartile
Genes detectedEDC4
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
The Parkinson's disease protein alpha-synuclein is a modulator of processing bodies and mRNA stability.
PMID: 35688132
Cell · 2022
1.00
2
The EDC4-XRN1 interaction controls P-body dynamics to link mRNA decapping with decay.
PMID: 37621215
EMBO J · 2023
0.90
3
P-bodies directly regulate MARF1-mediated mRNA decay in human cells.
PMID: 35801873
Nucleic Acids Res · 2022
0.80
4
EDC4 C-terminal domain scaffolds P-body assembly and links P-body dynamics to p53-mediated tumor suppression.
PMID: 40360209
RNA · 2025
0.70
5
The molecular axis hnRNPU/circKCNK2/EDC4/IL-11 aggravates osteolytic bone metastasis of RCC.
PMID: 40640337
Oncogene · 2025
0.60