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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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SMG5
SMG5 nonsense mediated mRNA decay factor
Chromosome 1 · 1q22
NCBI Gene: 23381Ensembl: ENSG00000198952.9HGNC: HGNC:24644UniProt: Q9UPR3
59PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingubiquitin protein ligase bindingtelomeric repeat DNA bindinghistone deacetylase bindingneurodegenerative diseasehepatocellular carcinomaneoplasmneural tube defects, folate-sensitive
✦AI Summary

SMG5 is an essential component of the nonsense-mediated mRNA decay (NMD) pathway, functioning as a key regulator of mRNA quality control 1. The protein forms a heterodimer with SMG7 that recognizes phosphorylated UPF1, specifically binding to phosphoserine residues in UPF1's C-terminal tail through its 14-3-3-like domain 2. This SMG5-SMG7 complex serves as an adapter linking UPF1 to protein phosphatase 2A (PP2A) to promote UPF1 dephosphorylation and connects the NMD machinery to exonucleolytic mRNA degradation pathways 1. Importantly, SMG5 is required for SMG6 endonucleolytic activity, establishing functional interdependence between NMD degradation branches 3. SMG5 can functionally substitute for SMG7, and either factor is sufficient to enable SMG6-mediated endonucleolysis of NMD targets 3. The protein is subject to microRNA regulation, with miR-433 targeting SMG5 mRNA to modulate NMD activity 4. SMG5 shows elevated expression in multiple cancers, particularly hepatocellular carcinoma, where it influences therapeutic resistance and cell proliferation 56. Beyond NMD, SMG5 is necessary for telomerase activity and involved in telomere maintenance, highlighting its diverse cellular functions.

Sources cited
1
SMG5 functions in NMD pathway and forms complex with SMG7 for exonucleolytic mRNA degradation
PMID: 29348139
2
SMG5-SMG7 heterodimer recognizes phosphorylated UPF1 through 14-3-3-like domains
PMID: 25013172
3
SMG5 is required for SMG6 endonucleolytic activity and can substitute for SMG7
PMID: 34172724
4
miR-433 regulates NMD by targeting SMG5 mRNA
PMID: 27473591
5
SMG5 is elevated in hepatocellular carcinoma and influences therapeutic resistance
PMID: 38647536
6
SMG5 is highly expressed in multiple cancer types and serves as prognostic biomarker
PMID: 37699361
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.53Moderate
hepatocellular carcinomaOpen Targets
0.11Weak
neoplasmOpen Targets
0.07Suggestive
neural tube defects, folate-sensitiveOpen Targets
0.05Suggestive
anencephaly 1Open Targets
0.05Suggestive
Isolated anencephaly/exencephalyOpen Targets
0.05Suggestive
Spina bifida - hypospadiasOpen Targets
0.05Suggestive
spina bifida-hypospadias syndromeOpen Targets
0.05Suggestive
uterine fibroidOpen Targets
0.04Suggestive
colorectal carcinomaOpen Targets
0.04Suggestive
atrial fibrillationOpen Targets
0.03Suggestive
cancerOpen Targets
0.03Suggestive
hypertensionOpen Targets
0.02Suggestive
infectionOpen Targets
0.01Suggestive
cleft palateOpen Targets
0.01Suggestive
liver cancerOpen Targets
0.00Suggestive
prostate cancerOpen Targets
0.00Suggestive
cervical cancerOpen Targets
0.00Suggestive
Marinesco-Sjogren syndromeOpen Targets
0.00Suggestive
obesityOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
STAU1Protein interaction100%EDC4Protein interaction100%UPF3AProtein interaction99%SMG9Protein interaction94%SMG8Protein interaction94%PABPC1Protein interaction93%
Tissue Expression6 tissues
Heart
100%
Liver
81%
Bone Marrow
79%
Lung
73%
Ovary
47%
Brain
43%
Gene Interaction Network
Click a node to explore
SMG5STAU1EDC4UPF3ASMG9SMG8PABPC1
PROTEIN STRUCTURE
Preparing viewer…
PDB2HWY · 2.75 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.53Moderately Constrained
pLIⓘ
0.06Tolerant
Observed/Expected LoF0.42 [0.34–0.53]
RankingsWhere SMG5 stands among ~20K protein-coding genes
  • #7,816of 20,598
    Most Researched59
  • #3,294of 17,882
    Most Constrained (LOEUF)0.53 · top quartile
Genes detectedSMG5
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Dissecting the functions of SMG5, SMG7, and PNRC2 in nonsense-mediated mRNA decay of human cells.
PMID: 29348139
RNA · 2018
1.00
2
Pan-Cancer Analysis of the Prognostic and Immunological Role of SMG5: A Biomarker for Cancers.
PMID: 37699361
Oncology · 2024
0.90
3
Phospho-dependent and phospho-independent interactions of the helicase UPF1 with the NMD factors SMG5-SMG7 and SMG6.
PMID: 25013172
Nucleic Acids Res · 2014
0.80
4
SMG5 Inhibition Restrains Hepatocellular Carcinoma Growth and Enhances Sorafenib Sensitivity.
PMID: 38647536
Mol Cancer Ther · 2024
0.70
5
NMD: nonsense-mediated defense.
PMID: 25211070
Cell Host Microbe · 2014
0.60