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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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ELK3
ETS transcription factor ELK3
Chromosome 12 · 12q23.1
NCBI Gene: 2004Ensembl: ENSG00000111145.9HGNC: HGNC:3325UniProt: P41970
67PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transcription Factor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
RNA polymerase II cis-regulatory region sequence-specific DNA bindingDNA-binding transcription repressor activity, RNA polymerase II-specificDNA-binding transcription activator activity, RNA polymerase II-specificprotein bindinghypothyroidismneurodegenerative diseaseCrohn's diseasethyroid disease
✦AI Summary

ELK3 (ETS transcription factor ELK3) is a member of the ETS transcription factor family that functions as both a transcriptional activator and repressor depending on cellular context. ELK3 directly binds to DNA through its ETS domain and regulates target gene expression through multiple mechanisms 1. The protein exhibits dual functionality, acting as a negative regulator under basal conditions but becoming a transcriptional activator when co-expressed with oncogenic signals like Ras or Src. ELK3's transcriptional activity is regulated through post-translational modifications, including phosphorylation-dependent ubiquitination and proteasomal degradation mediated by SPOP 2. The protein's stability is also controlled through m6A-dependent mRNA regulation by FTO 3. ELK3 plays significant roles in cancer progression, promoting cell proliferation, migration, invasion, and chemoresistance across multiple cancer types including T-cell leukemia, prostate cancer, lung cancer, and triple-negative breast cancer 4356. The transcription factor regulates diverse cellular processes including glycolytic metabolism, actin cytoskeleton remodeling, endothelial barrier function, and ferroptosis resistance 3675. Clinically, ELK3 serves as a prognostic biomarker and represents an emerging therapeutic target, with its expression correlating with poor patient outcomes and drug resistance in various malignancies.

Sources cited
1
ELK3 directly binds to target gene promoters to regulate transcription
PMID: 37400491
2
ELK3 is regulated by SPOP-mediated ubiquitination and degradation
PMID: 38632244
3
FTO regulates ELK3 mRNA stability in an m6A-dependent manner and ELK3 promotes glycolytic gene expression
PMID: 40435251
4
ELK3 functions as an oncogene promoting cancer cell proliferation, migration, invasion and chemoresistance
PMID: 37542863
5
ELK3 promotes gefitinib resistance by regulating SERPINE1 and inhibiting ferroptosis
PMID: 41380194
6
ELK3 regulates actin remodeling and immune cell responses through CYFIP2 suppression
PMID: 39930469
7
ELK3 regulates endothelial barrier function downstream of ALDH2-LIN28B signaling
PMID: 37822152
Disease Associationsⓘ20
hypothyroidismOpen Targets
0.48Moderate
neurodegenerative diseaseOpen Targets
0.44Moderate
Crohn's diseaseOpen Targets
0.37Weak
thyroid diseaseOpen Targets
0.33Weak
B-cell acute lymphoblastic leukemiaOpen Targets
0.32Weak
benign neoplasmOpen Targets
0.31Weak
polyarteritis nodosaOpen Targets
0.31Weak
inflammatory bowel diseaseOpen Targets
0.29Weak
small intestine carcinomaOpen Targets
0.27Weak
infectious arthritisOpen Targets
0.23Weak
vascular diseaseOpen Targets
0.23Weak
small intestine neuroendocrine tumorOpen Targets
0.19Weak
triple-negative breast cancerOpen Targets
0.11Weak
gliomaOpen Targets
0.10Suggestive
breast cancerOpen Targets
0.09Suggestive
gastric cancerOpen Targets
0.09Suggestive
neoplasmOpen Targets
0.08Suggestive
candidiasisOpen Targets
0.08Suggestive
age-related macular degenerationOpen Targets
0.07Suggestive
Hepatic fibrosisOpen Targets
0.07Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
PPDPFLShared pathway100%ETV3LShared pathway100%ERFLShared pathway100%NKX1-2Shared pathway100%NHSL2Shared pathway100%ZNF800Shared pathway100%
Tissue Expression6 tissues
Heart
100%
Lung
68%
Bone Marrow
40%
Ovary
26%
Liver
15%
Brain
14%
Gene Interaction Network
Click a node to explore
ELK3PPDPFLETV3LERFLNKX1-2NHSL2ZNF800
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt P41970
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.61LoF Tolerant
pLIⓘ
0.72Intermediate
Observed/Expected LoF0.36 [0.22–0.61]
RankingsWhere ELK3 stands among ~20K protein-coding genes
  • #6,978of 20,598
    Most Researched67
  • #4,212of 17,882
    Most Constrained (LOEUF)0.61 · top quartile
Genes detectedELK3
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Early Progression of Abdominal Aortic Aneurysm is Decelerated by Improved Endothelial Barrier Function via ALDH2-LIN28B-ELK3 Signaling.
PMID: 37822152
Adv Sci (Weinh) · 2023
1.00
2
FTO regulates ELK3-mediated metabolic rewiring and represents a unique therapeutic target in T cell leukemia.
PMID: 40435251
Sci Adv · 2025
0.90
3
ETS transcription factor ELK3 in human cancers: An emerging therapeutic target.
PMID: 37542863
Pathol Res Pract · 2023
0.80
4
ETS Transcription Factors in Immune Cells and Immune-Related Diseases.
PMID: 39337492
Int J Mol Sci · 2024
0.70
5
ELK3-CYFIP2 axis-mediated actin remodeling modulates metastasis and natural killer cell responses in triple-negative breast cancer.
PMID: 39930469
J Exp Clin Cancer Res · 2025
0.60