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10 sources retrieved Β· Most recent: April 2026 Β· Index updated 15 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
ESRP2
epithelial splicing regulatory protein 2
Chromosome 16 Β· 16q22.1
NCBI Gene: 80004Ensembl: ENSG00000103067.15HGNC: HGNC:26152UniProt: A0A0A1TE42
50PubMed Papers
20Diseases
0Drugs
2Pathogenic Variants
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
protein bindingRNA bindingmRNA bindingnucleusneurodegenerative diseasecleft lipParkinson diseaselysosomal storage disease
✦AI Summary

ESRP2 is an RNA-binding protein that functions as a splicing regulatory factor controlling the formation of epithelial cell-specific mRNA isoforms. It binds GU-rich sequence motifs in target pre-mRNAs and regulates alternative splicing of genes including FGFR2, CD44, CTNND1, and ENAH 1. ESRP2 acts as a critical regulator of the fetal-to-adult RNA splicing switch; its loss reactivates fetal splicing programs associated with disease pathogenesis. In hepatocellular carcinoma, ESRP2 suppression leads to aberrant TAK1 splicing, generating the oncogenic fetal isoform TAK1_Ξ”E12 that activates p38MAPK signaling and promotes tumor progression 1. Loss of ESRP2 impairs liver regeneration in alcohol-associated liver disease by dysregulating splicing of targets like Tcf4 and Slk, disrupting WNT and Hippo signaling pathways critical for hepatocyte function 2. In the inner ear, ESRP1/2 regulate mRNA stability of tmc1 and tmc2a, which encode essential mechanotransduction complex components required for hair cell function 3. ESRP2 also regulates craniofacial morphogenesis through CTNND1 splicing; variants affecting this pathway contribute to orofacial clefting 4. Clinically, ESRP2 expression shows complex associations with cancer prognosis. High ESRP2 expression predicts poor outcomes in prostate cancer, correlating with advanced stage and genomic instability 5, whereas suppression drives HCC progression. ESRP2 is downregulated in breast cancer as a consequence of enhancer methylation, with therapeutic implications 6.

Sources cited
1
ESRP2 controls fetal-to-adult splicing switch in HCC; loss activates TAK1_Ξ”E12 isoform and p38MAPK signaling to promote tumor progression
PMID: 37985644
2
ESRP2 deficiency impairs liver regeneration in alcoholic hepatitis by dysregulating Tcf4 and Slk splicing, disrupting WNT/Hippo signaling
PMID: 40931030
3
ESRP1/2 regulate stability of tmc1 and tmc2a mRNAs encoding mechanotransduction complex components required for inner ear hair cell function
PMID: 40086870
4
ESRP1/2 regulate CTNND1 splicing in embryonic epithelium; their disruption causes orofacial clefts in zebrafish, mice, and humans
PMID: 39179789
5
High ESRP2 nuclear expression in prostate cancer predicts advanced stage, high Gleason score, metastasis, and poor prognosis independent of established markers
PMID: 33339518
6
ESRP2 and ESRP2-antisense lncRNA are co-regulated by enhancer methylation; coordinate overexpression is associated with poor breast cancer prognosis
PMID: 28759043
Disease Associationsβ“˜20
neurodegenerative diseaseOpen Targets
0.47Moderate
cleft lipOpen Targets
0.39Weak
Alzheimer diseaseOpen Targets
0.32Weak
lysosomal storage diseaseOpen Targets
0.32Weak
multiple sclerosisOpen Targets
0.32Weak
Parkinson diseaseOpen Targets
0.32Weak
mathematical abilityOpen Targets
0.14Weak
breast cancerOpen Targets
0.10Weak
neoplasmOpen Targets
0.10Suggestive
hepatocellular carcinomaOpen Targets
0.09Suggestive
prostate cancerOpen Targets
0.08Suggestive
nonpapillary renal cell carcinomaOpen Targets
0.08Suggestive
cancerOpen Targets
0.07Suggestive
colorectal carcinomaOpen Targets
0.06Suggestive
progressive familial intrahepatic cholestasisOpen Targets
0.04Suggestive
Down syndromeOpen Targets
0.04Suggestive
diarrhea 13Open Targets
0.04Suggestive
subarachnoid hemorrhageOpen Targets
0.04Suggestive
hypermethioninemia with deficiency of S-adenosylhomocysteine hydrolaseOpen Targets
0.04Suggestive
Psychomotor retardation due to S-adenosylhomocysteine hydrolase deficiencyOpen Targets
0.04Suggestive
Pathogenic Variants2
NM_024939.3(ESRP2):c.1558C>T (p.Arg520Ter)Likely pathogenic
Cleft lip with or without cleft palate
β˜†β˜†β˜†β˜†β†’ Residue 520
NM_024939.3(ESRP2):c.944G>A (p.Arg315His)Likely pathogenic
Cleft lip with or without cleft palate
β˜†β˜†β˜†β˜†β†’ Residue 315
View on ClinVar β†—
Related Genes
CLK1Shared pathway100%HNRNPH2Shared pathway100%RBM12Shared pathway100%MBNL2Shared pathway100%RBM38Shared pathway100%MBNL3Shared pathway100%
Tissue Expression6 tissues
Liver
100%
Lung
14%
Bone Marrow
1%
Ovary
1%
Brain
1%
Heart
0%
Gene Interaction Network
Click a node to explore
ESRP2CLK1HNRNPH2RBM12MBNL2RBM38MBNL3
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt Q9H6T0
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
0.75LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.59 [0.47–0.75]
RankingsWhere ESRP2 stands among ~20K protein-coding genes
  • #8,805of 20,598
    Most Researched50
  • #4,435of 5,498
    Most Pathogenic Variants2
  • #5,989of 17,882
    Most Constrained (LOEUF)0.75
Genes detectedESRP2
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Loss of ESRP2 Activates TAK1-MAPK Signaling through the Fetal RNA-Splicing Program to Promote Hepatocellular Carcinoma Progression.
PMID: 37985644
Adv Sci (Weinh) Β· 2024
1.00
2
Dysregulated RNA splicing impairs regeneration in alcohol-associated liver disease.
PMID: 40931030
Nat Commun Β· 2025
0.90
3
Genome-wide screen for differentially methylated long noncoding RNAs identifies Esrp2 and lncRNA Esrp2-as regulated by enhancer DNA methylation with prognostic relevance for human breast cancer.
PMID: 28759043
Oncogene Β· 2017
0.80
4
Esrp1 and Esrp2 regulate the stability of
PMID: 40086870
J Neurosci Β· 2025
0.70
5
Functional analysis of ESRP1/2 gene variants and CTNND1 isoforms in orofacial cleft pathogenesis.
PMID: 39179789
Commun Biol Β· 2024
0.60