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10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
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FRG1
FSHD region gene 1
Chromosome 4 Β· 4q35.2
NCBI Gene: 2483Ensembl: ENSG00000109536.14HGNC: HGNC:3954UniProt: Q14331
92PubMed Papers
1Diseases
0Drugs
1Pathogenic Variants
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
catalytic step 2 spliceosomeprotein bindingRNA bindingstriated muscle dense bodyFacioscapulohumeral muscular dystrophy 1
✦AI Summary

FRG1 (FSHD region gene 1) is a conserved RNA-binding protein located on chromosome 4 that functions as both a nuclear and sarcomeric protein with multiple roles in gene expression regulation. FRG1 binds mRNA in a sequence-independent manner and participates in pre-mRNA splicing through its association with spliceosome components 1. The protein localizes dynamically to the nucleus during myoblast stages and then associates with Z-discs during myogenic differentiation, suggesting a developmentally regulated role in sarcomere maintenance 2. FRG1 acts as a direct transcriptional regulator of nonsense-mediated decay (NMD) genes through binding to conserved 'CTGGG' sequences in core NMD factor promoters 1. FRG1 is implicated in facioscapulohumeral muscular dystrophy (FSHD1), a progressive neuromuscular disorder affecting facial, scapular, humeral, and later truncal muscles 3. During FSHD myogenic differentiation, FRG1 shows premature expression due to D4Z4 repeat contraction, which disrupts normal chr4 looping between the FRG1 promoter and the D4Z4 array 4. FRG1 deficiency promotes upregulation of FBXO32 in pancreatic cancer, linking FRG1 loss to altered protein synthesis and cancer progression 5. Strong FRG1 expression in vascular tissues suggests relevance to FSHD-associated vascular pathology 2. The gene underwent evolutionary amplification in primates with multiple dispersed copies throughout the human genome 6.

Sources cited
1
FRG1 is a disease modifier at the FSHD locus implicated in FSHD1 pathophysiology alongside DUX4
PMID: 28915324
2
FRG1 is a dynamic nuclear and sarcomeric protein that localizes to Z-discs during myogenic differentiation and is expressed in muscle and vascular tissues
PMID: 20970242
3
FRG1 is a direct transcriptional regulator of nonsense-mediated decay genes through binding to CTGGG sequences
PMID: 36521634
4
FRG1 is prematurely expressed during FSHD myoblast differentiation due to altered chromatin structure and D4Z4 repeat contraction
PMID: 19607661
5
FRG1 deficiency promotes FBXO32 upregulation and pancreatic cancer progression through protein synthesis pathways
PMID: 38775804
6
FRG1 underwent evolutionary amplification in primates with multiple copies dispersed throughout the genome
PMID: 9931447
Disease Associationsβ“˜1
Facioscapulohumeral muscular dystrophy 1UniProt
Pathogenic Variants1
NM_004477.3(FRG1):c.322G>A (p.Ala108Thr)Pathogenic
Pulmonary artery atresia
β˜†β˜†β˜†β˜†β†’ Residue 108
View on ClinVar β†—
Related Genes
HNRNPA1L3Shared pathway100%RBMXL1Shared pathway100%RBMY1EShared pathway100%RBMY1DShared pathway100%RBM44Shared pathway100%HNRNPA3Shared pathway100%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
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FRG1HNRNPA1L3RBMXL1RBMY1ERBMY1DRBM44HNRNPA3
PROTEIN STRUCTURE
Preparing viewer…
PDB6ZYM Β· 3.40 Γ… Β· EM
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.77LoF Tolerant
pLIβ“˜
0.41Tolerant
Observed/Expected LoF0.39 [0.21–0.77]
RankingsWhere FRG1 stands among ~20K protein-coding genes
  • #5,185of 20,598
    Most Researched92
  • #4,912of 5,498
    Most Pathogenic Variants1
  • #6,179of 17,882
    Most Constrained (LOEUF)0.77
Genes detectedFRG1
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Facioscapulohumeral Muscular Dystrophy.
PMID: 28915324
Compr Physiol Β· 2017
1.00
2
FBXO32 Stimulates Protein Synthesis to Drive Pancreatic Cancer Progression and Metastasis.
PMID: 38775804
Cancer Res Β· 2024
0.90
3
Recent amplification of the human FRG1 gene during primate evolution.
PMID: 9931447
Gene Β· 1999
0.80
4
Remodeling of the chromatin structure of the facioscapulohumeral muscular dystrophy (FSHD) locus and upregulation of FSHD-related gene 1 (FRG1) expression during human myogenic differentiation.
PMID: 19607661
BMC Biol Β· 2009
0.70
5
FRG1, a gene in the FSH muscular dystrophy region on human chromosome 4q35, is highly conserved in vertebrates and invertebrates.
PMID: 9714712
Gene Β· 1998
0.60