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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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FRG2
FSHD region gene 2
Chromosome 4 · 4q35.2
NCBI Gene: 448831Ensembl: ENSG00000205097.7HGNC: HGNC:19136UniProt: Q64ET8
8PubMed Papers
0Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Swiss-Prot Reviewed
nucleus
✦AI Summary

FRG2 (FSHD region gene 2) encodes a long noncoding RNA (lncRNA) that plays a crucial role in ribosomal regulation and protein synthesis in skeletal muscle cells. FRG2A localizes to the nucleolus and associates with repetitive DNA at ribosomal DNA loci and centromeres, where elevated expression alters three-dimensional heterochromatin architecture and reduces rRNA transcription and translation rates 1. This results in decreased synthesis of skeletal muscle proteins, linking FRG2 dysfunction to muscle wasting in facioscapulohumeral muscular dystrophy (FSHD) 1. The gene is transcriptionally upregulated specifically in differentiating FSHD myoblasts through direct activation by the DUX4 transcription factor, which binds to FRG2 promoter sequences 2. FRG2 transcripts are chr4-associated and undergo posttranscriptional stabilization in response to DNA damage, with stabilization levels inversely correlated with D4Z4 repeat number 3. Beyond FSHD, FRG2 functions as a cancer stemness negative regulator in triple negative breast cancer, where its deletion promotes paclitaxel resistance and tumor metastasis, while increased expression sensitizes tumors to treatment 4. The protein shows nuclear localization and its overexpression causes morphological changes in cells 5.

Sources cited
1
FRG2A is a lncRNA that localizes to nucleolus, associates with rDNA, and reduces protein synthesis
PMID: 40637237
2
DUX4 directly activates FRG2 expression by binding to its promoter
PMID: 25789155
3
FRG2 transcripts are chromatin-associated and stabilized after DNA damage
PMID: 40320530
4
FRG2 acts as cancer stemness negative regulator in triple negative breast cancer
PMID: 37932309
5
FRG2 shows nuclear localization and overexpression causes morphological changes
PMID: 15520407
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
FRG1Protein interaction99%TNNT3Protein interaction99%MTMR1Protein interaction99%DUX4Protein interaction93%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
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FRG2FRG1TNNT3MTMR1DUX4
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q64ET8
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.89LoF Tolerant
pLIⓘ
0.05Tolerant
Observed/Expected LoF0.51 [0.31–0.89]
RankingsWhere FRG2 stands among ~20K protein-coding genes
  • #17,598of 20,598
    Most Researched8
  • #7,984of 17,882
    Most Constrained (LOEUF)0.89
Genes detectedFRG2
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Posttranscriptional RNA stabilization of telomeric RNAs FRG2, DBE-T, D4Z4 at human 4q35 in response to genotoxic stress and D4Z4 macrosatellite repeat length.
PMID: 40320530
Clin Epigenetics · 2025
1.00
2
Nucleolar FRG2 lncRNAs inhibit rRNA transcription and cytoplasmic translation, linking FSHD to dysregulation of muscle-specific protein synthesis.
PMID: 40637237
Nucleic Acids Res · 2025
0.90
3
Combined in vitro/in vivo genome-wide CRISPR screens in triple negative breast cancer identify cancer stemness regulators in paclitaxel resistance.
PMID: 37932309
Oncogenesis · 2023
0.80
4
DUX4 promotes transcription of FRG2 by directly activating its promoter in facioscapulohumeral muscular dystrophy.
PMID: 25789155
Skelet Muscle · 2014
0.70
5
FRG2, an FSHD candidate gene, is transcriptionally upregulated in differentiating primary myoblast cultures of FSHD patients.
PMID: 15520407
J Med Genet · 2004
0.60