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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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DUX4
double homeobox 4
Chromosome 4 · 4q35.2
NCBI Gene: 100288687Ensembl: ENSG00000260596.5HGNC: HGNC:50800UniProt: C3U3A0
144PubMed Papers
21Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
ApoptosisTranscription Factor
CLINICAL
OMIM Disease Gene
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
transcription cis-regulatory region bindingnucleusnucleoplasmnucleolusFacioscapulohumeral dystrophyfacioscapulohumeral muscular dystrophyneoplasmacute lymphoblastic leukemia
✦AI Summary

DUX4 is an early embryonic transcription factor that normally drives cleavage-stage gene expression and retrotransposon activation during preimplantation development 1. The protein functions as a DNA-binding transcription factor capable of activating hundreds of endogenous genes including ZSCAN4, KDM4E, and PRAMEF-family genes, as well as MERVL/HERVL retroviral elements 1. DUX4 also interacts with STAT1 to suppress interferon-stimulated gene expression, modulating immune signaling pathways 2. Pathologically, DUX4 misexpression in skeletal muscle causes facioscapulohumeral muscular dystrophy (FSHD), one of the most common muscular dystrophies 3. FSHD arises from derepression of DUX4 due to contraction of D4Z4 macrosatellite repeats on chromosome 4 or, in FSHD2, mutations in SMCHD1 affecting chr4 regulation 4. The resulting DUX4 toxicity causes progressive, asymmetric muscle weakness affecting facial, shoulder girdle, and extremity muscles, with extramuscular manifestations including pain, fatigue, and in severe cases, hearing loss and cognitive impairment 3. DUX4 fusion genes also drive aggressive malignancies, including CIC-DUX4 sarcomas (characterized by CIC::DUX4 translocations causing ETV4 overexpression) and DUX4-rearranged acute lymphoblastic leukemia 56. Currently, FSHD lacks curative therapies, though disease-modifying clinical trials targeting DUX4 are emerging 3.

Sources cited
1
DUX4 is a transcription factor that activates cleavage-stage genes and MERVL/HERVL retrotransposons during early embryonic development
PMID: 28459457
2
DUX4 protein interacts with STAT1 and suppresses interferon-stimulated gene expression
PMID: 37092726
3
DUX4 misexpression in skeletal muscle causes FSHD, resulting in progressive muscle weakness and extramuscular manifestations
PMID: 41037169
4
FSHD pathogenesis involves D4Z4 repeat contraction or SMCHD1 mutations causing DUX4 derepression
PMID: 29478599
5
CIC-DUX4 sarcomas are characterized by CIC::DUX4 translocations causing ETV4 overexpression and aggressive clinical behavior
PMID: 35730520
6
DUX4 fusion genes (IGH-DUX4, ERG-DUX4) drive pediatric B-cell precursor acute lymphoblastic leukemia
PMID: 27265895
Disease Associationsⓘ21
Facioscapulohumeral dystrophyOpen Targets
0.40Weak
facioscapulohumeral muscular dystrophyOpen Targets
0.12Weak
neoplasmOpen Targets
0.11Weak
acute lymphoblastic leukemiaOpen Targets
0.10Weak
cancerOpen Targets
0.10Weak
infectionOpen Targets
0.09Suggestive
sarcomaOpen Targets
0.09Suggestive
childhood leukemiaOpen Targets
0.08Suggestive
congenital rubellaOpen Targets
0.07Suggestive
metastatic malignant neoplasmOpen Targets
0.05Suggestive
Mobius syndromeOpen Targets
0.04Suggestive
urothelial carcinomaOpen Targets
0.04Suggestive
Duchenne muscular dystrophyOpen Targets
0.04Suggestive
Ewing sarcomaOpen Targets
0.03Suggestive
precursor B-cell acute lymphoblastic leukemiaOpen Targets
0.02Suggestive
leukemiaOpen Targets
0.02Suggestive
megalencephaly-capillary malformation-polymicrogyria syndromeOpen Targets
0.02Suggestive
myopathyOpen Targets
0.02Suggestive
rhabdomyosarcomaOpen Targets
0.02Suggestive
dermatofibrosarcoma protuberansOpen Targets
0.02Suggestive
Facioscapulohumeral muscular dystrophy 1UniProt
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
FRG1Protein interaction93%FRG2Protein interaction93%ETV5Protein interaction86%ETV1Protein interaction79%MBD3L2Protein interaction78%TRIM43Protein interaction78%
Tissue Expression6 tissues
Brain
100%
Heart
0%
Lung
0%
Bone Marrow
0%
Ovary
0%
Liver
0%
Gene Interaction Network
Click a node to explore
DUX4FRG1FRG2ETV5ETV1MBD3L2TRIM43
PROTEIN STRUCTURE
Preparing viewer…
PDB5Z2S · 1.50 Å · X-ray
View on RCSB ↗
RankingsWhere DUX4 stands among ~20K protein-coding genes
  • #3,157of 20,598
    Most Researched144 · top quartile
Genes detectedDUX4
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Conserved roles of mouse DUX and human DUX4 in activating cleavage-stage genes and MERVL/HERVL retrotransposons.
PMID: 28459457
Nat Genet · 2017
1.00
2
CIC-DUX4 sarcomas.
PMID: 35730520
Curr Opin Oncol · 2022
0.90
3
The evolution of DUX4 gene regulation and its implication for facioscapulohumeral muscular dystrophy.
PMID: 35158020
Biochim Biophys Acta Mol Basis Dis · 2022
0.80
4
Identification of ETV6-RUNX1-like and DUX4-rearranged subtypes in paediatric B-cell precursor acute lymphoblastic leukaemia.
PMID: 27265895
Nat Commun · 2016
0.70
5
CIC-Rearranged Sarcoma.
PMID: 38278603
Surg Pathol Clin · 2024
0.60