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GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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GBA3
glucosylceramidase beta 3 (gene/pseudogene)
Chromosome 4 · 4p15.2
NCBI Gene: 57733Ensembl: ENSG00000291927.2HGNC: HGNC:19069UniProt: A8K9N1
52PubMed Papers
0Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
glucosylceramide catabolic processgalactosylceramidase activityglucosylceramidase activityoligosaccharide catabolic process
✦AI Summary

GBA3 is a cytosolic neutral β-glucosidase with broad substrate specificity involved in glycosphingolipid catabolism 1. It possesses glucosylceramidase activity in vitro, though this activity is relatively low and its physiological significance remains unclear 2. GBA3 hydrolyzes galactosylceramides, glucosylsphingosines, and galactosylsphingosines, and can metabolize diverse dietary glycosides including xenobiotics and phytoestrogens 1. Additionally, GBA3 exhibits transxylosylase activity and may participate in cytosolic sialyl free N-glycan catabolism by stabilizing the sialidase NEU2 3. Notably, GBA3 is a polymorphic pseudogene in humans with a truncated allele that is inactivating, and the gene has undergone repeated pseudogenization events across mammalian evolution, possibly linked to dietary adaptations 4. Unlike GBA1 (deficiency causes Gaucher disease), GBA3 deficiency does not influence type 1 Gaucher disease manifestation 2. However, decreased GBA3 expression correlates with poor prognosis in hepatocellular carcinoma patients, suggesting potential tumor-suppressive functions 5. GBA3 is primarily expressed in kidney, liver, spleen, intestine, and lymphocytes 1.

Sources cited
1
GBA3 is a cytosolic β-glucosidase with glucosylceramidase activity, tissue distribution, and relationship to cancer
PMID: 26582417
2
GBA3 hydrolyzes artificial substrates but shows minimal activity on natural glucosylceramide and does not influence Gaucher disease
PMID: 20728381
3
GBA3 participates in cytosolic sialyl free N-glycan catabolism by interacting with and stabilizing NEU2
PMID: 26193330
4
GBA3 is a polymorphic pseudogene in humans with loss-of-function alleles and has undergone pseudogenization events across mammals
PMID: 32665690
5
Decreased GBA3 expression correlates with poor prognosis in hepatocellular carcinoma patients
PMID: 32412773
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
CTBSShared pathway43%NAGAShared pathway43%NEU3Shared pathway38%GLAShared pathway38%FUCA1Shared pathway33%AMY2AShared pathway33%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
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GBA3CTBSNAGANEU3GLAFUCA1AMY2A
PROTEIN STRUCTURE
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PDB2E9L · 1.60 Å · X-ray
View on RCSB ↗
RankingsWhere GBA3 stands among ~20K protein-coding genes
  • #8,555of 20,598
    Most Researched52
Genes detectedGBA3
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Synthesis and Biological Evaluation of Deoxycyclophellitols as Human Retaining β-Glucosidase Inhibitors.
PMID: 39305182
Chemistry · 2024
1.00
2
Glucosylceramidases and malignancies in mammals.
PMID: 26582417
Biochimie · 2016
0.90
3
Co-Expression of NEU2 and GBA3 Causes a Drastic Reduction in Cytosolic Sialyl Free N-glycans in Human MKN45 Stomach Cancer Cells-Evidence for the Physical Interaction of NEU2 and GBA3.
PMID: 26193330
Biomolecules · 2015
0.80
4
Decreased expression of GBA3 correlates with a poor prognosis in hepatocellular carcinoma patients.
PMID: 32412773
Neoplasma · 2020
0.70
5
GBA3: a polymorphic pseudogene in humans that experienced repeated gene loss during mammalian evolution.
PMID: 32665690
Sci Rep · 2020
0.60