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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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GPC1
glypican 1
Chromosome 2 · 2q37.3
NCBI Gene: 2817Ensembl: ENSG00000063660.10HGNC: HGNC:4449UniProt: A0A384NPH9
111PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
copper ion bindingprotein bindingmembrane raftheparan sulfate proteoglycan catabolic processCOVID-19dengue diseaseandrogenetic alopeciaKeloid
✦AI Summary

GPC1 (glypican 1) is a heparan sulfate proteoglycan anchored to the plasma membrane via a glycosylphosphatidylinositol anchor 1. Its primary function involves regulating signaling pathways through heparan sulfate-dependent binding to growth factors and morphogens, particularly modulating fibroblast growth factor (FGF) signaling and Hedgehog pathways 1. GPC1 negatively regulates FGF2-mediated signaling by sequestering FGF2 in lipid rafts, preventing receptor binding and inhibiting proliferation in keratinocytes and other cell types 2. Clinically, GPC1 serves as a cancer biomarker, being specifically enriched on cancer-derived exosomes and circulating supermeres 34. GPC1-positive circulating exosomes detect pancreatic cancer with absolute specificity and sensitivity, correlating with tumor burden and patient survival, offering potential for non-invasive early cancer diagnosis 3. Additionally, GPC1 is implicated in biliary atresia susceptibility; deletions at chromosome 2.3 affecting GPC1 increase disease risk in genetically susceptible individuals, with zebrafish studies demonstrating that Gpc1 knockdown causes developmental biliary defects through dysregulated Hedgehog signaling 5. GPC1 expression significantly decreases with age in skin keratinocytes, suggesting importance in skin aging and maintaining epidermal function 2.

Sources cited
1
GPC1 is a heparan sulfate proteoglycan with GPI anchor that regulates Wnt, Hedgehog, FGF and BMP signaling pathways
PMID: 18505598
2
GPC1 is the major glypican expressed in human keratinocytes, decreases with age, and modulates FGF2-induced proliferation
PMID: 31430521
3
GPC1 is specifically enriched on cancer-derived exosomes and detects pancreatic cancer with high specificity and sensitivity
PMID: 26106858
4
GPC1 is highly enriched in cancer-derived supermeres and functions as a disease biomarker
PMID: 34887515
5
GPC1 deletions increase biliary atresia susceptibility through dysregulated Hedgehog signaling
PMID: 23336978
Disease Associationsⓘ20
COVID-19Open Targets
0.54Moderate
dengue diseaseOpen Targets
0.46Moderate
androgenetic alopeciaOpen Targets
0.29Weak
KeloidOpen Targets
0.28Weak
infectious diseaseOpen Targets
0.23Weak
liver diseaseOpen Targets
0.20Weak
cholelithiasisOpen Targets
0.16Weak
neoplasmOpen Targets
0.12Weak
hepatocellular carcinomaOpen Targets
0.11Weak
prostate cancerOpen Targets
0.10Weak
cancerOpen Targets
0.10Weak
colorectal carcinomaOpen Targets
0.10Weak
esophageal squamous cell carcinomaOpen Targets
0.10Suggestive
breast cancerOpen Targets
0.10Suggestive
gliomaOpen Targets
0.09Suggestive
glioblastoma multiformeOpen Targets
0.08Suggestive
pancreatic neoplasmOpen Targets
0.08Suggestive
Malignant Pancreatic NeoplasmOpen Targets
0.06Suggestive
ovarian dysfunctionOpen Targets
0.06Suggestive
esophageal adenocarcinomaOpen Targets
0.06Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
EGFRProtein interaction100%TGFB1Protein interaction100%APOEProtein interaction100%HSPG2Protein interaction99%HBEGFProtein interaction97%FGF22Protein interaction94%
Tissue Expression6 tissues
Heart
100%
Ovary
54%
Liver
42%
Brain
25%
Lung
20%
Bone Marrow
1%
Gene Interaction Network
Click a node to explore
GPC1EGFRTGFB1APOEHSPG2HBEGFFGF22
PROTEIN STRUCTURE
Preparing viewer…
PDB4YWT · 2.38 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.84LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.60 [0.43–0.84]
RankingsWhere GPC1 stands among ~20K protein-coding genes
  • #4,273of 20,598
    Most Researched111 · top quartile
  • #7,252of 17,882
    Most Constrained (LOEUF)0.84
Genes detectedGPC1
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Glypican-1 identifies cancer exosomes and detects early pancreatic cancer.
PMID: 26106858
Nature · 2015
1.00
2
The biology, function, and applications of exosomes in cancer.
PMID: 34589397
Acta Pharm Sin B · 2021
0.90
3
Supermeres are functional extracellular nanoparticles replete with disease biomarkers and therapeutic targets.
PMID: 34887515
Nat Cell Biol · 2021
0.80
4
Glypicans.
PMID: 18505598
Genome Biol · 2008
0.70
5
Evidence from human and zebrafish that GPC1 is a biliary atresia susceptibility gene.
PMID: 23336978
Gastroenterology · 2013
0.60