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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
GYG1
glycogenin 1
Chromosome 3 Β· 3q24
NCBI Gene: 2992Ensembl: ENSG00000163754.19HGNC: HGNC:4699UniProt: P46976
61PubMed Papers
22Diseases
0Drugs
40Pathogenic Variants
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
protein bindingglycogenin glucosyltransferase activitymembranemanganese ion bindingpolyglucosan body myopathy type 2glycogen storage disease XVGlycogen storage disease due to glycogenin deficiencydisorder of glycogen metabolism
✦AI Summary

GYG1 (glycogenin-1) is a critical enzyme that initiates glycogen biosynthesis by catalyzing the formation of short alpha(1,4)-glucosyl chains covalently attached to internal tyrosine residues, which serve as primers for glycogen synthase-mediated elongation 1. The enzyme functions through autoglucosylation to seed glycogen molecules and works in close coordination with glycogen synthase-1 (GYS1) in an asymmetric complex that facilitates handoff of the glycogen chain for subsequent elongation 1. GYG1 plays a fundamental role in cellular glucose homeostasis by regulating glycogen synthesis and breakdown in a cell-type-dependent manner, coordinating with GYG2 to modulate glycogen synthase activity 2. Mutations in GYG1 cause glycogen storage disease 15 and polyglucosan body myopathy 2, characterized by abnormal polyglucosan accumulation in muscle tissue 34. These disorders typically present with muscle weakness, atrophy, and in some cases cardiomyopathy with cardiac conduction defects 56. The polyglucosan bodies formed are amylopectin-like polysaccharides that are partially resistant to Ξ±-amylase digestion and have characteristic fibrillar appearance under electron microscopy 3. GYG1 deficiency represents one of the newly identified muscle glycogenoses that has expanded understanding of glycogen metabolism pathways 7.

Sources cited
1
GYG1 initiates glycogen synthesis through autoglucosylation and works with GYS1 in complex for chain handoff
PMID: 35793618
2
GYG1 coordinates with GYG2 to regulate glucose homeostasis and glycogen synthesis
PMID: 40670355
3
GYG1 mutations cause polyglucosan storage diseases with characteristic fibrillar polyglucosan bodies
PMID: 26278982
4
GYG1 deficiency causes polyglucosan body myopathy, sometimes with cardiomyopathy
PMID: 28737584
5
GYG1 deficiency presents with muscle atrophy and weakness
PMID: 30397902
6
GYG1 is among metabolic disorders causing cardiac manifestations
PMID: 37239976
7
GYG1 represents one of the newly identified muscle glycogenoses
PMID: 27663060
Disease Associationsβ“˜22
polyglucosan body myopathy type 2Open Targets
0.79Strong
glycogen storage disease XVOpen Targets
0.76Strong
Glycogen storage disease due to glycogenin deficiencyOpen Targets
0.63Moderate
disorder of glycogen metabolismOpen Targets
0.55Moderate
neurodegenerative diseaseOpen Targets
0.37Weak
allergic contact dermatitisOpen Targets
0.32Weak
atrial fibrillationOpen Targets
0.32Weak
Acute rhabdomyolysisOpen Targets
0.27Weak
genetic disorderOpen Targets
0.19Weak
Abruptio PlacentaeOpen Targets
0.19Weak
hypertrophic cardiomyopathyOpen Targets
0.18Weak
atrial flutterOpen Targets
0.14Weak
hypertensionOpen Targets
0.07Suggestive
SepsisOpen Targets
0.06Suggestive
Posterior fusion of lumbosacral vertebrae - blepharoptosisOpen Targets
0.06Suggestive
posterior fusion of lumbosacral vertebrae-blepharoptosis syndromeOpen Targets
0.06Suggestive
Congenital pulmonary alveolar proteinosisOpen Targets
0.05Suggestive
Neonatal acute respiratory distress with surfactant metabolism deficiencyOpen Targets
0.05Suggestive
autosomal recessive spondylocostal dysostosisOpen Targets
0.05Suggestive
Klippel-Feil syndrome 3, autosomal dominantOpen Targets
0.04Suggestive
Glycogen storage disease 15UniProt
Polyglucosan body myopathy 2UniProt
Pathogenic Variants40
NM_004130.4(GYG1):c.143+3G>CPathogenic
Polyglucosan body myopathy type 2|not provided|Glycogen storage disease XV;Polyglucosan body myopathy type 2|Glycogen storage disease XV|Clear cell carcinoma of kidney
β˜…β˜…β˜†β˜†2026
NM_004130.4(GYG1):c.304G>C (p.Asp102His)Pathogenic
Polyglucosan body myopathy type 2|not provided|Glycogen storage disease XV;Polyglucosan body myopathy type 2|not specified|GYG1-related disorder|Glycogen storage disease XV|Glycogen storage disease|Sarcoma|Acute rhabdomyolysis|Ovarian serous cystadenocarcinoma|Thyroid cancer, nonmedullary, 1|Melanoma|Familial cancer of breast
β˜…β˜…β˜†β˜†2026β†’ Residue 102
NM_004130.4(GYG1):c.482-1G>CLikely pathogenic
Glycogen storage disease XV;Polyglucosan body myopathy type 2|Polyglucosan body myopathy type 2
β˜…β˜…β˜†β˜†2026
NM_004130.4(GYG1):c.646C>T (p.Arg216Ter)Pathogenic
not provided|Polyglucosan body myopathy type 2;Glycogen storage disease XV|Polyglucosan body myopathy type 2
β˜…β˜…β˜†β˜†2026β†’ Residue 216
NM_004130.4(GYG1):c.487del (p.Asp163fs)Pathogenic
Polyglucosan body myopathy type 2|not provided|Glycogen storage disease XV|Glycogen storage disease XV;Polyglucosan body myopathy type 2
β˜…β˜…β˜†β˜†2026β†’ Residue 163
NM_004130.4(GYG1):c.970C>T (p.Arg324Ter)Pathogenic
Polyglucosan body myopathy type 2|Glycogen storage disease XV;Polyglucosan body myopathy type 2
β˜…β˜…β˜†β˜†2025β†’ Residue 324
NM_004130.4(GYG1):c.7+1G>ALikely pathogenic
Polyglucosan body myopathy type 2|Glycogen storage disease XV;Polyglucosan body myopathy type 2|Lung cancer
β˜…β˜…β˜†β˜†2025
NM_004130.4(GYG1):c.832dup (p.Ser278fs)Pathogenic
not provided|Glycogen storage disease XV;Polyglucosan body myopathy type 2
β˜…β˜…β˜†β˜†2025β†’ Residue 278
NM_004130.4(GYG1):c.7+2T>CLikely pathogenic
Polyglucosan body myopathy type 2|Polyglucosan body myopathy type 2;Glycogen storage disease XV
β˜…β˜…β˜†β˜†2023
NM_004130.4(GYG1):c.829-2delLikely pathogenic
Polyglucosan body myopathy type 2;Glycogen storage disease XV
β˜…β˜†β˜†β˜†2025
NM_004130.4(GYG1):c.352_353del (p.Glu118fs)Pathogenic
Polyglucosan body myopathy type 2;Glycogen storage disease XV
β˜…β˜†β˜†β˜†2025β†’ Residue 118
NM_004130.4(GYG1):c.35del (p.Asn12fs)Pathogenic
Glycogen storage disease XV;Polyglucosan body myopathy type 2
β˜…β˜†β˜†β˜†2025β†’ Residue 12
NM_004130.4(GYG1):c.481+2T>CLikely pathogenic
Glycogen storage disease XV;Polyglucosan body myopathy type 2
β˜…β˜†β˜†β˜†2025
NM_004130.4(GYG1):c.996_1005del (p.Asp331_Tyr332insTer)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 331
NM_004130.4(GYG1):c.844_845insG (p.Tyr282Ter)Pathogenic
Glycogen storage disease XV;Polyglucosan body myopathy type 2
β˜…β˜†β˜†β˜†2025β†’ Residue 282
NM_004130.4(GYG1):c.797_798dup (p.Val267fs)Pathogenic
Glycogen storage disease XV;Polyglucosan body myopathy type 2
β˜…β˜†β˜†β˜†2025β†’ Residue 267
NM_004130.4(GYG1):c.561T>G (p.Tyr187Ter)Pathogenic
Glycogen storage disease XV;Polyglucosan body myopathy type 2
β˜…β˜†β˜†β˜†2025β†’ Residue 187
NM_004130.4(GYG1):c.631del (p.Val211fs)Pathogenic
Polyglucosan body myopathy type 2;Glycogen storage disease XV
β˜…β˜†β˜†β˜†2025β†’ Residue 211
NM_004130.4(GYG1):c.558_561del (p.Tyr187fs)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 187
NM_004130.4(GYG1):c.221T>A (p.Leu74Ter)Pathogenic
Glycogen storage disease XV;Polyglucosan body myopathy type 2
β˜…β˜†β˜†β˜†2025β†’ Residue 74
View on ClinVar β†—
Related Genes
SOX12Protein interaction99%TRIM7Protein interaction99%PYGBProtein interaction96%PYGLProtein interaction96%AMY1BProtein interaction92%AMY2AProtein interaction92%
Tissue Expression6 tissues
Heart
100%
Bone Marrow
73%
Lung
46%
Brain
39%
Ovary
31%
Liver
10%
Gene Interaction Network
Click a node to explore
GYG1SOX12TRIM7PYGBPYGLAMY1BAMY2A
PROTEIN STRUCTURE
Preparing viewer…
PDB3U2U Β· 1.45 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
1.38LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF1.05 [0.80–1.38]
RankingsWhere GYG1 stands among ~20K protein-coding genes
  • #7,559of 20,598
    Most Researched61
  • #1,546of 5,498
    Most Pathogenic Variants40
  • #14,396of 17,882
    Most Constrained (LOEUF)1.38
Genes detectedGYG1
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
A 20-year Clinical and Genetic Neuromuscular Cohort Analysis in Lebanon: An International Effort.
PMID: 34602496
J Neuromuscul Dis Β· 2022
1.00
2
Metabolic Cardiomyopathies and Cardiac Defects in Inherited Disorders of Carbohydrate Metabolism: A Systematic Review.
PMID: 37239976
Int J Mol Sci Β· 2023
0.90
3
Polyglucosan storage myopathies.
PMID: 26278982
Mol Aspects Med Β· 2015
0.80
4
Myopathies Related to Glycogen Metabolism Disorders.
PMID: 30397902
Neurotherapeutics Β· 2018
0.70
5
Update on new muscle glycogenosis.
PMID: 28737584
Curr Opin Neurol Β· 2017
0.60