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50 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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HDAC2
histone deacetylase 2
Chromosome 6 · 6q21
NCBI Gene: 3066Ensembl: ENSG00000196591.13HGNC: HGNC:4853UniProt: Q92769
824PubMed Papers
20Diseases
14Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Hub GeneTranscription Factor
RESEARCH IMPACT
Highly StudiedTrending
CLINICAL
FDA Approved Target
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
positive regulation of proteolysisnegative regulation of transcription by RNA polymerase IInucleuschromatinneoplasmCutaneous T-cell lymphomamultiple myelomaDuchenne muscular dystrophy
✦AI Summary

HDAC2 (histone deacetylase 2) is a chr6-modifying enzyme that catalyzes the removal of acetyl groups from histone lysine residues, leading to transcriptional repression and playing crucial roles in cancer progression and therapeutic resistance 12. The enzyme functions through multiple mechanisms including direct histone deacetylation and formation of transcriptional repressor complexes. HDAC2 promotes malignant progression in various cancers by transcriptionally activating oncogenes like LAPTM4B in hepatocellular carcinoma 2 and regulating autophagy pathways. In colorectal cancer, HDAC2 epigenetically silences the pyroptosis mediator NLRP3 through H3K27 deacetylation, limiting therapeutic-induced cell death 3. The enzyme also contributes to chemotherapy resistance by mediating protein delactylation, as demonstrated in triple-negative breast cancer where HDAC2 delactylates METTL3 to enhance DNA damage repair and cisplatin resistance 4. Additionally, HDAC2 regulates angiogenesis through a feedback loop with H3K9 lactylation in endothelial cells 1. Therapeutically, HDAC2 represents a promising target, with inhibitors showing efficacy in sensitizing cancer cells to conventional therapies and alleviating pathological processes like liver fibrosis 5. High HDAC2 expression correlates with poor prognosis across multiple cancer types 23.

⚠Limited data available — This gene has 0 indexed publications. Summary and analysis may be incomplete.
Disease Associationsⓘ20
neoplasmOpen Targets
0.58Moderate
Cutaneous T-cell lymphomaOpen Targets
0.56Moderate
multiple myelomaOpen Targets
0.56Moderate
Duchenne muscular dystrophyOpen Targets
0.52Moderate
neurodegenerative diseaseOpen Targets
0.52Moderate
unspecified peripheral T-cell lymphomaOpen Targets
0.52Moderate
T-cell non-Hodgkin lymphomaOpen Targets
0.50Moderate
mature T-cell and NK-cell non-Hodgkin lymphomaOpen Targets
0.46Moderate
lymphomaOpen Targets
0.38Weak
breast cancerOpen Targets
0.38Weak
acute myeloid leukemiaOpen Targets
0.37Weak
renal cell carcinomaOpen Targets
0.37Weak
lysosomal storage diseaseOpen Targets
0.33Weak
pulmonary vascular congestionOpen Targets
0.32Weak
Hodgkins lymphomaOpen Targets
0.30Weak
myelodysplastic syndromeOpen Targets
0.30Weak
response to antihypertensive drugOpen Targets
0.30Weak
polycythemia veraOpen Targets
0.29Weak
follicular lymphomaOpen Targets
0.29Weak
lung cancerOpen Targets
0.29Weak
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Drug Targets14
ABEXINOSTATPhase III
Histone deacetylase inhibitor
follicular lymphoma
BELINOSTATApproved
Histone deacetylase inhibitor
T-cell non-Hodgkin lymphoma
CUDC-101Phase I
Epidermal growth factor receptor erbB1 inhibitor
ENTINOSTATApproved
Histone deacetylase inhibitor
neoplasm
FIMEPINOSTATPhase II
Histone deacetylase inhibitor
lymphoma
GIVINOSTATApproved
Histone deacetylase inhibitor
Duchenne muscular dystrophy
GIVINOSTAT HYDROCHLORIDEApproved
Histone deacetylase inhibitor
Duchenne muscular dystrophy
MOCETINOSTATPhase II
Histone deacetylase 11 inhibitor
non-small cell lung carcinoma
PANOBINOSTATApproved
Histone deacetylase inhibitor
multiple myeloma
PANOBINOSTAT LACTATEApproved
Histone deacetylase inhibitor
multiple myeloma
QUISINOSTATPhase II
Histone deacetylase inhibitor
ROMIDEPSINApproved
Histone deacetylase inhibitor
T-cell non-Hodgkin lymphoma
TACEDINALINEPhase II
Histone deacetylase inhibitor
VORINOSTATApproved
Histone deacetylase 2 inhibitor
T-cell non-Hodgkin lymphoma
Related Genes
CTBP1Protein interaction100%CTBP2Protein interaction100%GATA3Protein interaction100%GFI1Protein interaction100%PHF21AProtein interaction100%TRPS1Protein interaction100%
Tissue Expression6 tissues
Brain
100%
Bone Marrow
50%
Ovary
30%
Heart
29%
Lung
23%
Liver
13%
Gene Interaction Network
Click a node to explore
HDAC2CTBP1CTBP2GATA3GFI1PHF21ATRPS1
PROTEIN STRUCTURE
Preparing viewer…
PDB7KBG · 1.26 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.37Moderately Constrained
pLIⓘ
0.99Intolerant
Observed/Expected LoF0.08 [0.03–0.37]
RankingsWhere HDAC2 stands among ~20K protein-coding genes
  • #231of 20,598
    Most Researched824 · top 5%
  • #184of 1,025
    FDA-Approved Drug Targets8 · top quartile
  • #1,677of 17,882
    Most Constrained (LOEUF)0.37 · top 10%
Genes detectedHDAC2
Sources retrieved50 papers
Response time—
📄 Sources
50▼
1
A feedback loop driven by H3K9 lactylation and HDAC2 in endothelial cells regulates VEGF-induced angiogenesis.
PMID: 38918851
Genome Biol · 2024
1.00
2
Discovery of novel and potent dual-targeting AXL/HDAC2 inhibitors for colorectal cancer treatment via structure-based pharmacophore modelling, virtual screening, and molecular docking, molecular dynamics simulation studies, and biological evaluation.
PMID: 38134358
J Enzyme Inhib Med Chem · 2024
0.90
3
PJA2 Suppresses Colorectal Cancer Progression by Controlling HDAC2 Degradation and Stability.
PMID: 39928532
Adv Sci (Weinh) · 2025
0.82
4
HBV-associated hepatocellular carcinomas inhibit antitumor CD8
PMID: 40021665
Nat Commun · 2025
0.80
5
Targeting epigenetically maladapted vascular niche alleviates liver fibrosis in nonalcoholic steatohepatitis.
PMID: 34613814
Sci Transl Med · 2021
0.80