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GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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HS1BP3
HCLS1 binding protein 3
Chromosome 2 · 2p24.1
NCBI Gene: 64342Ensembl: ENSG00000118960.14HGNC: HGNC:24979UniProt: Q53T59
28PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingregulation of apoptotic processmitochondrionendoplasmic reticulumliver diseaseprolapse of female genital organTietze syndromecervical squamous intraepithelial neoplasia
✦AI Summary

HS1BP3 is a multifunctional PX domain protein that regulates apoptosis, autophagy, and cell proliferation through distinct mechanisms. As an HS1-binding protein, HS1BP3 modulates lymphocyte signaling 1 and overexpression of HS1BP3 induces apoptosis in HEK293T and HeLa cells through HS1-dependent pathways, characterized by PARP cleavage and AP-1 transcriptional activation 2. HS1BP3 negatively regulates autophagosome formation by inhibiting PLD1 activity and localization to ATG16L1-positive membranes, thereby reducing phosphatidic acid content at autophagosome precursor sites [PMID:28004827; 34]. In hepatocellular carcinoma, HS1BP3 promotes tumor progression and is transcriptionally regulated by estrogen receptor 1 (ESR1); silencing HS1BP3 inhibits HCC cell proliferation and migration while promoting apoptosis 4. Additionally, HS1BP3 expression levels discriminate radiotherapy responders from non-responders in rectal cancer, suggesting roles in DNA damage response and autophagy-related processes 5. These findings establish HS1BP3 as a critical regulator of cell survival decisions with implications for cancer progression and therapeutic resistance.

Sources cited
1
HS1BP3 is an HS1-binding protein with PX domain that associates with HS1 and may modulate IL-2 signaling in lymphocytes
PMID: 10590261
2
HS1BP3 overexpression induces apoptosis via HS1 pathway and enhances AP-1-mediated transcription
PMID: 21699750
3
HS1BP3 negatively regulates autophagosome formation by inhibiting PLD1 activity and modulating phosphatidic acid levels
PMID: 28004827
4
HS1BP3 depletion increases LC3-positive autophagosome formation through PLD1-mediated phosphatidic acid regulation
PMID: 28318354
5
HS1BP3 is transcriptionally regulated by ESR1 and promotes hepatocellular carcinoma progression and poor prognosis
PMID: 35921704
6
HS1BP3 expression discriminates radiotherapy responders in rectal cancer and is associated with autophagy and DNA damage repair
PMID: 40574313
Disease Associationsⓘ20
liver diseaseOpen Targets
0.29Weak
prolapse of female genital organOpen Targets
0.28Weak
Tietze syndromeOpen Targets
0.13Weak
cervical squamous intraepithelial neoplasiaOpen Targets
0.06Suggestive
HypercholesterolemiaOpen Targets
0.06Suggestive
prostate carcinomaOpen Targets
0.06Suggestive
esophageal diseaseOpen Targets
0.05Suggestive
hypertrophic cardiomyopathyOpen Targets
0.05Suggestive
prostate cancerOpen Targets
0.05Suggestive
Barrett's esophagusOpen Targets
0.05Suggestive
glomerulonephritisOpen Targets
0.04Suggestive
cervix erosionOpen Targets
0.04Suggestive
diverticular diseaseOpen Targets
0.04Suggestive
pelvic organ prolapseOpen Targets
0.04Suggestive
hemorrhoidOpen Targets
0.04Suggestive
poisoningOpen Targets
0.03Suggestive
female reproductive system diseaseOpen Targets
0.03Suggestive
Abdominal Aortic AneurysmOpen Targets
0.03Suggestive
pulmonary fibrosis and/or bone marrow failure syndrome, telomere-related, 9Open Targets
0.03Suggestive
tooth diseaseOpen Targets
0.03Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes

No related genes found for this gene.

Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network

No interaction data available for this gene.

PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q53T59
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.21LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.88 [0.65–1.21]
RankingsWhere HS1BP3 stands among ~20K protein-coding genes
  • #12,363of 20,598
    Most Researched28
  • #12,746of 17,882
    Most Constrained (LOEUF)1.21
Genes detectedHS1BP3
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Human HS1BP3 induces cell apoptosis and activates AP-1.
PMID: 21699750
BMB Rep · 2011
1.00
2
HS1BP3 inhibits autophagy by regulation of PLD1.
PMID: 28318354
Autophagy · 2017
0.90
3
HS1BP3, transcriptionally regulated by ESR1, promotes hepatocellular carcinoma progression.
PMID: 35921704
Biochem Biophys Res Commun · 2022
0.80
4
Genetics of essential tremor.
PMID: 22166413
Parkinsonism Relat Disord · 2012
0.70
5
Proteomic Analysis of FFPE Tissue Samples Identifies Potential Molecular Mechanisms Mediating Resistance to Radiotherapy in Rectal Cancer.
PMID: 40574313
J Proteome Res · 2025
0.60