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GeneE
3 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
LGALS9B
galectin 9B
Chromosome 17 Β· 17p11.2
NCBI Gene: 284194Ensembl: ENSG00000170298.17HGNC: HGNC:24842UniProt: Q3B8N2
12PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
protein bindinggalactoside bindingcarbohydrate bindingpositive regulation of gene expressionFamilial hemophagocytic lymphohistiocytosisFelty's syndromehyper-IgM syndrome type 3immunodeficiency 99 with hypogammaglobulinemia and autoimmune cytopenias
✦AI Summary

LGALS9B (galectin 9B) is a carbohydrate-binding protein with emerging roles in cancer pathogenesis. Primary Function: LGALS9B binds galactosides and regulates protein-protein interactions, functioning as a molecular scaffold that influences cell signaling cascades 1. Mechanism: In gastric cancer, LGALS9B stabilizes the eukaryotic translation elongation factor EEF1D by competing with the E3 ligase HERC5 for binding, preventing EEF1D degradation and subsequently activating the PI3K/AKT signaling pathway 1. Disease Relevance: LGALS9B overexpression promotes gastric cancer cell proliferation, migration, and invasion, while knockdown inhibits these processes both in vitro and in vivo 1. Additionally, LGALS9B methylation status serves as a prognostic biomarker in kidney renal papillary cell carcinoma (KIRP), with specific methylated sites (cg24387542) helping classify patients into risk groups for survival prediction 2. Clinical Significance: LGALS9B is identified as a co-expression partner of PDZ-binding kinase in hepatocellular carcinoma protein interaction networks 3, suggesting involvement in broader cancer-associated signaling networks. These findings position LGALS9B as a potential therapeutic target for managing gastric and renal cancers.

Sources cited
1
LGALS9B stabilizes EEF1D protein, prevents its degradation by HERC5, and activates PI3K/AKT signaling to promote gastric cancer proliferation, migration, and invasion
PMID: 39639171
2
LGALS9B methylation site (cg24387542) is a component of a DNA methylation signature that independently predicts survival in kidney renal papillary cell carcinoma with prognostic value
PMID: 33381555
3
LGALS9B is a significant co-expression partner in protein-protein interaction networks associated with hepatocellular carcinoma pathogenesis
PMID: 35065633
⚠Limited data available β€” This gene has 3 indexed publications. Summary and analysis may be incomplete.
Disease Associationsβ“˜20
Familial hemophagocytic lymphohistiocytosisOpen Targets
0.05Suggestive
Felty's syndromeOpen Targets
0.05Suggestive
hyper-IgM syndrome type 3Open Targets
0.05Suggestive
immunodeficiency 99 with hypogammaglobulinemia and autoimmune cytopeniasOpen Targets
0.05Suggestive
glycoprotein storage diseaseOpen Targets
0.05Suggestive
combined immunodeficiency due to partial RAG1 deficiencyOpen Targets
0.05Suggestive
Combined immunodeficiency T+ B+ due to partial RAG1 deficiencyOpen Targets
0.05Suggestive
short-limb skeletal dysplasia with severe combined immunodeficiencyOpen Targets
0.05Suggestive
reticular dysgenesisOpen Targets
0.05Suggestive
severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, NK cell-positiveOpen Targets
0.05Suggestive
T-B+ severe combined immunodeficiency due to JAK3 deficiencyOpen Targets
0.05Suggestive
immunodeficiency 105Open Targets
0.05Suggestive
BENTA diseaseOpen Targets
0.05Suggestive
severe combined immunodeficiency due to CD70 deficiencyOpen Targets
0.05Suggestive
autoimmune lymphoproliferative syndrome type 4Open Targets
0.05Suggestive
RAS-associated autoimmune leukoproliferative diseaseOpen Targets
0.05Suggestive
activated PI3K-delta syndromeOpen Targets
0.04Suggestive
immunodeficiency 73c with defective neutrophil chemotaxis and hypogammaglobulinemiaOpen Targets
0.04Suggestive
gamma chain deficiencyOpen Targets
0.04Suggestive
Kimura diseaseOpen Targets
0.04Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar β†—
Related Genes
LGALS9CShared pathway100%CTLA4Protein interaction99%TNFRSF9Protein interaction99%LAG3Protein interaction99%PDCD1Protein interaction99%TNFRSF14Protein interaction99%
Tissue Expression6 tissues
Lung
100%
Bone Marrow
67%
Liver
33%
Brain
0%
Heart
0%
Ovary
0%
Gene Interaction Network
Click a node to explore
LGALS9BLGALS9CCTLA4TNFRSF9LAG3PDCD1TNFRSF14
PROTEIN STRUCTURE
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AlphaFoldAI-predicted Β· UniProt Q3B8N2
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
0.74LoF Tolerant
pLIβ“˜
0.30Tolerant
Observed/Expected LoF0.41 [0.24–0.74]
RankingsWhere LGALS9B stands among ~20K protein-coding genes
  • #16,490of 20,598
    Most Researched12
  • #5,859of 17,882
    Most Constrained (LOEUF)0.74
Genes detectedLGALS9B
Sources retrieved3 papers
Response timeβ€”
πŸ“„ Sources
3
1
LGALS9B stabilizes EEF1D protein and activates the PI3K/AKT signaling pathway to promote gastric cancer occurrence and metastasis.
PMID: 39639171
Oncogene Β· 2025
1.00
2
cg04448376, cg24387542, cg08548498, and cg14621323 as a Novel Signature to Predict Prognosis in Kidney Renal Papillary Cell Carcinoma.
PMID: 33381555
Biomed Res Int Β· 2020
0.67
3
High expression of PDZ-binding kinase is correlated with poor prognosis and immune infiltrates in hepatocellular carcinoma.
PMID: 35065633
World J Surg Oncol Β· 2022
0.33