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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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LIMS1
LIM zinc finger domain containing 1
Chromosome 2 · 2q12.3
NCBI Gene: 3987Ensembl: ENSG00000169756.17HGNC: HGNC:6616UniProt: A0A8Q3WKI3
117PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
focal adhesionprotein bindingzinc ion bindingprotein kinase bindingAbruptio PlacentaepoisoningHirsutismpolymyalgia rheumatica
✦AI Summary

LIMS1 (LIM zinc finger domain containing 1) is an evolutionarily conserved adaptor protein functioning within the IPP complex to promote F-actin bundling and dynamic cell adhesion events 1. The protein binds zinc ions and regulates actin filament network formation, supporting cell spreading and migration through focal adhesion reorganization. LIMS1 plays critical roles in diverse physiological processes. In bone marrow, PINCH1/2 (LIMS1 orthologs) are essential for mesenchymal stromal cell immunosuppressive function and hematopoietic regulation through CXCL12-MBL2 signaling 2. In kidney, LIMS1 is transcriptionally regulated by HIF-1α and promotes angiotensin II-induced tubulointerstitial fibrosis via vimentin interaction 3. In pancreatic cancer, LIMS1 elevation promotes cell survival under hypoxia-glucose deprivation through AKT/mTOR-dependent HIF1A translation and GLUT1 upregulation 4. Cardiac dysfunction occurs when LIMS1 is lost; zebrafish lims1 mutants develop severe chamber remodeling, systolic dysfunction, and heart failure via gp130/JAK1/STAT3 pathway hyperactivation 1. In transplantation, LIMS1 locus mismatches between donor-recipient pairs represent a minor histocompatibility antigen, associating with allograft rejection and anti-LIMS1 antibody responses 56. These findings establish LIMS1 as a multifunctional adaptor with implications for cardiac, renal, cancer, and transplant pathologies.

Sources cited
1
LIMS1 loss causes cardiac remodeling and heart failure via gp130/JAK1/STAT3 pathway activation; elevated LIMS1 in dilated cardiomyopathy patients
PMID: 40252966
2
PINCH1/2 proteins (LIMS1 orthologs) are critical for mesenchymal stromal cell function in immune suppression and hematopoiesis through CXCL12-MBL2 pathway
PMID: 38062244
3
LIMS1 is transcriptionally regulated by HIF-1α and promotes angiotensin II-induced tubulointerstitial fibrosis via vimentin interaction; elevated in hypertensive nephropathy
PMID: 38698737
4
LIMS1 expression elevated in pancreatic cancer; promotes cell survival under oxygen-glucose deprivation by enhancing HIF1A translation via AKT/mTOR signaling and GLUT1 upregulation
PMID: 30679163
5
LIMS1 locus rs893403 shows genomic collision-associated allograft rejection; LIMS1 is a kidney-expressed minor histocompatibility antigen triggering anti-LIMS1 IgG2/IgG3 responses
PMID: 31091373
6
LIMS1 intronic haplotype mismatches associate with kidney allograft loss; LIMS1 SNPs act as eQTLs for GCC2, affecting TGF-β1/SMAD pathway in T cells
PMID: 37676733
Disease Associationsⓘ20
Abruptio PlacentaeOpen Targets
0.32Weak
poisoningOpen Targets
0.31Weak
HirsutismOpen Targets
0.28Weak
polymyalgia rheumaticaOpen Targets
0.25Weak
polycythemia veraOpen Targets
0.23Weak
congenital anomaly of cardiovascular systemOpen Targets
0.23Weak
neoplasmOpen Targets
0.10Weak
lung adenocarcinomaOpen Targets
0.08Suggestive
head and neck squamous cell carcinomaOpen Targets
0.08Suggestive
myopiaOpen Targets
0.06Suggestive
Alzheimer diseaseOpen Targets
0.06Suggestive
brain aneurysmOpen Targets
0.05Suggestive
non-small cell lung carcinomaOpen Targets
0.05Suggestive
kidney diseaseOpen Targets
0.04Suggestive
facial morphologyOpen Targets
0.04Suggestive
esophageal squamous cell carcinomaOpen Targets
0.03Suggestive
colorectal cancerOpen Targets
0.03Suggestive
skin neoplasmOpen Targets
0.03Suggestive
breast cancerOpen Targets
0.03Suggestive
gliomaOpen Targets
0.03Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
TLN2Protein interaction100%TLN1Protein interaction100%PXNProtein interaction100%NCK2Protein interaction100%RSU1Protein interaction99%TMSB4XProtein interaction98%
Tissue Expression6 tissues
Lung
100%
Heart
68%
Ovary
49%
Brain
42%
Bone Marrow
32%
Liver
29%
Gene Interaction Network
Click a node to explore
LIMS1TLN2TLN1PXNNCK2RSU1TMSB4X
PROTEIN STRUCTURE
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PDB4HI8 · 1.20 Å · X-ray
View on RCSB ↗
RankingsWhere LIMS1 stands among ~20K protein-coding genes
  • #4,048of 20,598
    Most Researched117 · top quartile
Genes detectedLIMS1
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
The bone-liver interaction modulates immune and hematopoietic function through Pinch-Cxcl12-Mbl2 pathway.
PMID: 38062244
Cell Death Differ · 2024
1.00
2
A protocol for exosome isolation and characterization: evaluation of ultracentrifugation, density-gradient separation, and immunoaffinity capture methods.
PMID: 25820723
Methods Mol Biol · 2015
0.90
3
Loss of lims1 causes aberrant cardiac remodeling and heart failure via activating gp130/Jak1/Stat3 pathway in zebrafish.
PMID: 40252966
J Genet Genomics · 2025
0.80
4
HIF-1α and adaptor protein LIM and senescent cell antigen-like domains protein 1 axis promotes tubulointerstitial fibrosis by interacting with vimentin in angiotensin II-induced hypertension.
PMID: 38698737
Br J Pharmacol · 2024
0.70
5
Genetic background and transplantation outcomes: insights from genome-wide association studies.
PMID: 31815792
Curr Opin Organ Transplant · 2020
0.60