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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
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LPP
LIM domain containing preferred translocation partner in lipoma
Chromosome 3 Β· 3q27.3-q28
NCBI Gene: 4026Ensembl: ENSG00000145012.16HGNC: HGNC:6679UniProt: B7Z871
144PubMed Papers
20Diseases
0Drugs
2Pathogenic Variants
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
focal adhesioncell junctionprotein bindingcytosolasthmabasal cell carcinomarespiratory system diseaseopen-angle glaucoma
✦AI Summary

LPP (LIM domain containing preferred translocation partner in lipoma) is a structural and signaling protein that functions at cell adhesion sites to maintain cell shape and motility. The protein serves as a scaffold for assembling protein complexes in both cytoplasm and nucleus, facilitating signal transduction from focal adhesions to the nucleus [UniProt]. This integration of signals from cell-cell adhesion and soluble factors enables coordinated cellular responses [UniProt]. Genetically, LPP polymorphisms show significant disease associations. The rs1464510 A allele is protective against celiac disease, reducing risk by approximately 52%, while the C allele increases risk 2.6-fold in Punjabi Pakistani populations 1. Meta-analysis confirms LPP rs1464510 as a celiac disease risk factor across European and American populations, with the minor A allele conferring 1.26-fold increased risk 2. Additionally, the rs2378456 CC genotype increases astrocytoma risk (OR=1.43) 3. These disease associations suggest LPP's involvement in immune regulation and cellular proliferation control. The protein's role in signal integration at adhesion sites, combined with genetic evidence linking specific polymorphisms to autoimmune and neoplastic diseases, indicates LPP functions as a critical hub coordinating cellular responses to multiple signaling inputs.

Sources cited
1
LPP rs1464510 polymorphism associates with celiac disease risk; A allele is protective (OR 0.48), C allele increases risk (OR 3.65)
PMID: 39062631
2
Meta-analysis showing LPP rs1464510 minor A allele increases celiac disease risk (OR 1.26) across European and American populations
PMID: 28208589
3
LPP rs2378456 CC genotype increases astrocytoma risk (OR 1.43)
PMID: 31440994
⚠Limited data available β€” This gene has 3 indexed publications. Summary and analysis may be incomplete.
Disease Associationsβ“˜20
asthmaOpen Targets
0.55Moderate
basal cell carcinomaOpen Targets
0.52Moderate
respiratory system diseaseOpen Targets
0.51Moderate
open-angle glaucomaOpen Targets
0.50Moderate
glaucomaOpen Targets
0.49Moderate
hypothyroidismOpen Targets
0.48Moderate
celiac diseaseOpen Targets
0.48Moderate
skin neoplasmOpen Targets
0.48Moderate
skin cancerOpen Targets
0.47Moderate
chronic rhinosinusitisOpen Targets
0.46Moderate
thyroid diseaseOpen Targets
0.46Moderate
allergic diseaseOpen Targets
0.46Moderate
acute myeloid leukemiaOpen Targets
0.45Moderate
allergic rhinitisOpen Targets
0.45Moderate
actinic keratosisOpen Targets
0.45Moderate
cutaneous melanomaOpen Targets
0.44Moderate
diabetes mellitusOpen Targets
0.43Moderate
childhood onset asthmaOpen Targets
0.43Moderate
autoimmune diseaseOpen Targets
0.42Moderate
VitiligoOpen Targets
0.42Moderate
Pathogenic Variants2
NC_000003.12:g.(?_188343948)_(188435451_?)delLikely pathogenic
Schizophrenia
β˜…β˜†β˜†β˜†2018
NC_000003.12:g.(?_188420063)_(188540464_?)delLikely pathogenic
Schizophrenia
β˜…β˜†β˜†β˜†2018
View on ClinVar β†—
Related Genes
VSIG10L2Shared pathway100%IGSF5Shared pathway100%TMEM47Shared pathway100%VEZTShared pathway100%FBLIM1Shared pathway100%TRIM29Shared pathway100%
Tissue Expression6 tissues
Lung
100%
Heart
66%
Ovary
60%
Liver
44%
Brain
27%
Bone Marrow
17%
Gene Interaction Network
Click a node to explore
LPPVSIG10L2IGSF5TMEM47VEZTFBLIM1TRIM29
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt Q93052
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
0.77LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.57 [0.44–0.77]
RankingsWhere LPP stands among ~20K protein-coding genes
  • #3,165of 20,598
    Most Researched144 Β· top quartile
  • #4,274of 5,498
    Most Pathogenic Variants2
  • #6,162of 17,882
    Most Constrained (LOEUF)0.77
Genes detectedLPP
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Updates In Therapeutics for Lichen Planus Pigmentosus.
PMID: 35254753
J Drugs Dermatol Β· 2022
1.00
2
Lichen planus pigmentosus and its variants: review and update.
PMID: 29076159
Int J Dermatol Β· 2018
0.90
3
LPP and RYR2 Gene Polymorphisms Correlate with the Risk and the Prognosis of Astrocytoma.
PMID: 31440994
J Mol Neurosci Β· 2019
0.80
4
Association of
PMID: 39062631
Genes (Basel) Β· 2024
0.70
5
Effect of motor control training and breathing exercises on pain, disability and core muscle activity in women with postpartum lumbopelvic pain: a study protocol for randomised controlled trial study.
PMID: 40032376
BMJ Open Β· 2025
0.60