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GeneE
4 sources retrieved Β· Most recent: April 2026 Β· Index updated 15 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
LRATD1
LRAT domain containing 1
Chromosome 2 Β· 2p24.3
NCBI Gene: 151354Ensembl: ENSG00000162981.15HGNC: HGNC:20743UniProt: Q96KN4
14PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
protein bindingcell morphogenesiscell motilitycytoplasmsialadenitismixed connective tissue diseasemale infertilitymale reproductive organ cancer
✦AI Summary

LRATD1 (LRAT domain containing 1) is a substrate protein of N-Myristoyltransferases (NMTs) identified through interactome analysis 1. The protein is predicted to play a role in cell morphology and motility based on functional annotations, though direct experimental evidence of its specific molecular function is limited. LRATD1 contains an LRAT domain and functions as a substrate for NMT1/2-mediated N-terminal myristoylation 1, a post-translational modification that typically regulates protein localization and function. The myristoylation of LRATD1 suggests involvement in cellular processes requiring membrane association or protein-protein interactions. While no disease-specific studies directly examine LRATD1, its identification as an NMT substrate places it within the broader context of PTM regulation affecting cell biology. The clinical significance of LRATD1 remains to be established, as functional studies characterizing its role in normal physiology and disease pathogenesis have not been reported in available literature. Further investigation is needed to elucidate LRATD1's specific cellular functions and potential involvement in disease processes.

Sources cited
1
LRATD1 was identified as a previously unknown substrate protein of human NMT1/2 through interactome data mining; demonstrates that NMT enzymes catalyze N-terminal myristoylation
PMID: 34956690
⚠Limited data available β€” This gene has 1 indexed publication. Summary and analysis may be incomplete.
Disease Associationsβ“˜20
sialadenitisOpen Targets
0.32Weak
mixed connective tissue diseaseOpen Targets
0.30Weak
male infertilityOpen Targets
0.25Weak
male reproductive organ cancerOpen Targets
0.25Weak
ocular hypotensionOpen Targets
0.23Weak
multiple sclerosisOpen Targets
0.23Weak
ankylosing spondylitisOpen Targets
0.22Weak
metabolic diseaseOpen Targets
0.22Weak
enteritisOpen Targets
0.21Weak
color vision disorderOpen Targets
0.21Weak
Abnormality of the integumentOpen Targets
0.21Weak
ovarian neoplasmOpen Targets
0.20Weak
Parkinson diseaseOpen Targets
0.20Weak
hypertensionOpen Targets
0.20Weak
pituitary gland diseaseOpen Targets
0.19Weak
pyogenic granulomaOpen Targets
0.19Weak
SplenomegalyOpen Targets
0.18Weak
hidradenitisOpen Targets
0.18Weak
mental or behavioural disorderOpen Targets
0.17Weak
epilepsyOpen Targets
0.17Weak
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar β†—
Related Genes
FRYLShared pathway33%SHROOM1Shared pathway33%FRYShared pathway33%IER2Shared pathway25%ELMO3Shared pathway25%POTEFShared pathway25%
Tissue Expression6 tissues
Brain
100%
Ovary
59%
Lung
15%
Heart
13%
Liver
13%
Bone Marrow
0%
Gene Interaction Network
Click a node to explore
LRATD1FRYLSHROOM1FRYIER2ELMO3POTEF
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt Q96KN4
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
1.08LoF Tolerant
pLIβ“˜
0.02Tolerant
Observed/Expected LoF0.60 [0.35–1.08]
RankingsWhere LRATD1 stands among ~20K protein-coding genes
  • #15,910of 20,598
    Most Researched14
  • #10,923of 17,882
    Most Constrained (LOEUF)1.08
Genes detectedLRATD1
Sources retrieved4 papers
Response timeβ€”
πŸ“„ Sources
4
1
Binding Affinity Determines Substrate Specificity and Enables Discovery of Substrates for N-Myristoyltransferases.
PMID: 34956690
ACS Catal Β· 2021
1.00
2
The direct miR-874-3p-target FAM84A promotes tumor development in papillary thyroid cancer.
PMID: 33751775
Mol Oncol Β· 2021
0.75
3
Epigenome-wide association study of breast cancer using prospectively collected sister study samples.
PMID: 23578854
J Natl Cancer Inst Β· 2013
0.50
4
A gene encoding a family with sequence similarity 84, member A (FAM84A) enhanced migration of human colon cancer cells.
PMID: 16820875
Int J Oncol Β· 2006
0.25