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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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LRIG1
leucine rich repeats and immunoglobulin like domains 1
Chromosome 3 · 3p14.1
NCBI Gene: 26018Ensembl: ENSG00000144749.15HGNC: HGNC:17360UniProt: Q96JA1
107PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingsignaling receptor activitysensory perception of soundplasma membraneatrial fibrillationAbnormality of the skeletal systemchronic kidney diseasehyperuricemia
✦AI Summary

LRIG1 is a transmembrane protein that functions as a negative regulator of receptor tyrosine kinase (RTK) signaling through enhancement of receptor ubiquitination and degradation 1. Beyond its classical role in RTK antagonism, LRIG1 operates as a pleiotropic tumor suppressor regulating stem cell quiescence across multiple tissues 1. In colonic stem cells, LRIG1 marks hyperproliferative cancer stem cells driven by oncogenic mutations, distinguishing them from fibroblast-induced quiescent stem cells 2. LRIG1 also functions as an immune checkpoint receptor by binding VISTA, suppressing T cell receptor signaling in CD8+ tumor-infiltrating lymphocytes 3. In intestinal inflammation, macrophage-derived VISTA engages LRIG1 on intestinal stem cells to suppress PPARα signaling, impairing epithelial repair in colitis 4. Clinically, LRIG1 expression serves as a prognostic biomarker; reduced expression correlates with poor survival in breast cancer, nasopharyngeal carcinoma, and other malignancies 5. LRIG1 is predominantly expressed in epithelial tissues and scattered neurons as an integral cell-surface protein 6. These findings support developing LRIG1-based therapeutics and targeting the VISTA/LRIG1 axis for cancer immunotherapy and inflammatory bowel disease treatment.

Sources cited
1
LRIG1 regulates stem cell quiescence and functions as a pleiotropic tumor suppressor primarily by antagonizing ERBB and other RTKs
PMID: 33476721
2
LRIG1 marks hyperproliferative oncogene-driven colonic cancer stem cells in organoid models
PMID: 38065080
3
LRIG1 acts as an inhibitory immune checkpoint receptor by binding VISTA and suppressing T cell receptor signaling in CD8+ T cells
PMID: 38758807
4
Macrophage-derived VISTA engages LRIG1 on intestinal stem cells to suppress PPARα and impair epithelial repair in colitis
PMID: 40883589
5
LRIG1 expression has prognostic value in multiple cancer types; loss correlates with poor survival in breast cancer and nasopharyngeal carcinoma
PMID: 25180912
6
LRIG1 is an integral cell-surface membrane protein expressed in epithelial tissues, neurons, and muscles
PMID: 12684867
Disease Associationsⓘ20
atrial fibrillationOpen Targets
0.53Moderate
Abnormality of the skeletal systemOpen Targets
0.46Moderate
chronic kidney diseaseOpen Targets
0.35Weak
hyperuricemiaOpen Targets
0.34Weak
gliomaOpen Targets
0.34Weak
central nervous system cancerOpen Targets
0.31Weak
anemia (phenotype)Open Targets
0.31Weak
type 2 diabetes mellitusOpen Targets
0.31Weak
skull disorderOpen Targets
0.30Weak
placental retentionOpen Targets
0.27Weak
Abnormal erythrocyte morphologyOpen Targets
0.18Weak
immune system diseaseOpen Targets
0.16Weak
intestinal diseaseOpen Targets
0.13Weak
neoplasmOpen Targets
0.12Weak
breast cancerOpen Targets
0.11Weak
cancerOpen Targets
0.10Weak
melanomaOpen Targets
0.10Weak
urinary bladder carcinomaOpen Targets
0.10Suggestive
posterior cortical atrophyOpen Targets
0.08Suggestive
gastric cancerOpen Targets
0.08Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
ZNF354AShared pathway100%GRXCR2Shared pathway100%CEACAM16Shared pathway100%LHFPL3Shared pathway100%CCDC50Shared pathway100%OTOSShared pathway100%
Tissue Expression6 tissues
Heart
100%
Brain
76%
Liver
41%
Ovary
32%
Bone Marrow
27%
Lung
25%
Gene Interaction Network
Click a node to explore
LRIG1ZNF354AGRXCR2CEACAM16LHFPL3CCDC50OTOS
PROTEIN STRUCTURE
Preparing viewer…
PDB4U7L · 2.30 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.65LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.51 [0.40–0.65]
RankingsWhere LRIG1 stands among ~20K protein-coding genes
  • #4,445of 20,598
    Most Researched107 · top quartile
  • #4,651of 17,882
    Most Constrained (LOEUF)0.65
Genes detectedLRIG1
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
An oncogenic phenoscape of colonic stem cell polarization.
PMID: 38065080
Cell · 2023
1.00
2
LRIG1 engages ligand VISTA and impairs tumor-specific CD8
PMID: 38758807
Sci Immunol · 2024
0.90
3
Construction of human LRIG1-TAT fusions and TAT-mediated LRIG1 protein delivery.
PMID: 25661388
Biomed Pharmacother · 2015
0.80
4
LRIG1, a regulator of stem cell quiescence and a pleiotropic feedback tumor suppressor.
PMID: 33476721
Semin Cancer Biol · 2022
0.70
5
Macrophage-derived VISTA engages with LRIG1 and hinders gut epithelial repair in colitis.
PMID: 40883589
Cell Mol Immunol · 2025
0.60