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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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LYNX1
Ly6/neurotoxin 1
Chromosome 8 · 8q24.3
NCBI Gene: 66004Ensembl: ENSG00000180155.21HGNC: HGNC:29604UniProt: P0DP58
26PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
acetylcholine receptor bindingregulation of neurotransmitter receptor activityacetylcholine receptor regulator activityplasma membranetinea pedisgastric carcinomadermatophytosisdermatomycosis
✦AI Summary

LYNX1 is a GPI-anchored prototoxin that modulates nicotinic acetylcholine receptor (nAChR) function through allosteric mechanisms 1. It acts as a concentration-dependent modulator of multiple nAChR subtypes, enhancing desensitization and altering single-channel properties 2. At low micromolar concentrations, LYNX1 acts as a positive allosteric modulator of α7-nAChRs, increasing acetylcholine-evoked currents, while higher concentrations produce inhibition 3. The protein regulates nAChR pentameric assembly and shifts stoichiometry toward lower-sensitivity configurations, preventing excessive excitation-induced neurodegeneration. In the central nervous system, LYNX1 is colocalized with nAChRs in brain regions critical for learning and memory 3. Water-soluble LYNX1 variants enhance synaptic plasticity and long-term potentiation while ameliorating cognitive impairments associated with α7-nAChR dysfunction 3. Beyond the brain, LYNX1 is expressed in lung epithelium where it functions as a negative modulator of nicotinic signaling 4. In lung cancer, LYNX1 expression is decreased compared to normal tissue, and its expression suppresses cancer cell proliferation through α7-nAChR modulation and activation of PKC/IP3, MAP/ERK, p38, and JNK signaling pathways 5. These findings suggest LYNX1 serves as an endogenous regulator of lung cancer growth and represents a potential therapeutic target 4.

Sources cited
1
LYNX1 is a prototoxin with allosteric modulatory effects on nAChR function and involvement in neuroplasticity, learning, and memory
PMID: 37437646
2
LYNX1 interacts with nAChRs in a concentration-dependent manner; at 1 μM enhances α7-nAChR response, while higher concentrations inhibit multiple nAChR subtypes
PMID: 21252236
3
Water-soluble LYNX1 acts as positive allosteric modulator of α7-nAChRs, enhances synaptic plasticity and long-term potentiation, and ameliorates cognitive impairment from α7-nAChR dysfunction
PMID: 32222974
4
LYNX1 acts as negative modulator of nicotinic signaling in lung epithelium; expression is decreased in lung cancer and suppression of LYNX1 increases cancer cell growth
PMID: 26025503
5
Water-soluble LYNX1 inhibits lung cancer A549 cell growth through α7-nAChR modulation, cell cycle arrest, and activation of PKC/IP3, MAP/ERK, p38, and JNK pathways
PMID: 31150435
Disease Associationsⓘ20
tinea pedisOpen Targets
0.22Weak
gastric carcinomaOpen Targets
0.20Weak
dermatophytosisOpen Targets
0.15Weak
dermatomycosisOpen Targets
0.11Weak
Alzheimer diseaseOpen Targets
0.07Suggestive
fragile X syndromeOpen Targets
0.06Suggestive
epidermolytic hyperkeratosis 2A, autosomal dominantOpen Targets
0.05Suggestive
congenital non-bullous ichthyosiform erythrodermaOpen Targets
0.05Suggestive
focal palmoplantar and gingival keratodermaOpen Targets
0.05Suggestive
ichthyosis, lamellar, autosomal dominantOpen Targets
0.05Suggestive
ichthyosis hystrix of Curth-MacklinOpen Targets
0.05Suggestive
palmoplantar keratoderma, nonepidermolytic, focal 1Open Targets
0.05Suggestive
ichthyosis, congenital, autosomal recessive 13Open Targets
0.05Suggestive
pretibial dystrophic epidermolysis bullosaOpen Targets
0.05Suggestive
Keratoderma hereditarium mutilans with ichthyosisOpen Targets
0.05Suggestive
epidermolytic hyperkeratosis 2B, autosomal recessiveOpen Targets
0.04Suggestive
porokeratosis plantaris palmaris et disseminataOpen Targets
0.04Suggestive
autosomal dominant epidermolytic ichthyosisOpen Targets
0.04Suggestive
loricrin keratodermaOpen Targets
0.04Suggestive
Polymicrogyria due to TUBB2B mutationOpen Targets
0.04Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
LY6G6DShared pathway100%LY6SShared pathway100%SLURP2Shared pathway100%LYPD1Shared pathway100%LY6KProtein interaction97%SLURP1Protein interaction97%
Tissue Expression6 tissues
Heart
100%
Liver
29%
Brain
28%
Ovary
13%
Lung
5%
Bone Marrow
1%
Gene Interaction Network
Click a node to explore
LYNX1LY6G6DLY6SSLURP2LYPD1LY6KSLURP1
PROTEIN STRUCTURE
Preparing viewer…
PDB2L03 · NMR
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.57LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.89 [0.52–1.57]
RankingsWhere LYNX1 stands among ~20K protein-coding genes
  • #12,819of 20,598
    Most Researched26
  • #15,554of 17,882
    Most Constrained (LOEUF)1.57
Genes detectedLYNX1
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Lynx1 and the family of endogenous mammalian neurotoxin-like proteins and their roles in modulating nAChR function.
PMID: 37437646
Pharmacol Res · 2023
1.00
2
Water-soluble variant of human Lynx1 positively modulates synaptic plasticity and ameliorates cognitive impairment associated with α7-nAChR dysfunction.
PMID: 32222974
J Neurochem · 2020
0.90
3
Emerging Role of Lymphocyte Antigen-6 Family of Genes in Cancer and Immune Cells.
PMID: 31068932
Front Immunol · 2019
0.80
4
NMR structure and action on nicotinic acetylcholine receptors of water-soluble domain of human LYNX1.
PMID: 21252236
J Biol Chem · 2011
0.70
5
Water-soluble variant of human Lynx1 induces cell cycle arrest and apoptosis in lung cancer cells via modulation of α7 nicotinic acetylcholine receptors.
PMID: 31150435
PLoS One · 2019
0.60