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GeneE
1 sources retrieved Β· Most recent: April 2026 Β· Index updated 15 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
LY6S
lymphocyte antigen 6 family member S
Chromosome 8 Β· 8q24.3
NCBI Gene: 105375795Ensembl: ENSG00000291309.3HGNC: HGNC:54397UniProt: P0DTL4
2PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
acetylcholine receptor inhibitor activityacetylcholine receptor bindingacetylcholine receptor signaling pathwayplasma membranealcohol drinkingneoplasmhepatocellular carcinomaleukemia
✦AI Summary

Based on limited published evidence, LY6S encodes an interferon-inducible, GPI-linked protein belonging to the lymphocyte antigen 6 family. GO annotations indicate roles in acetylcholine receptor binding and signaling at the plasma membrane. LY6S-iso1, the primary protein product, contains 9 of 10 consensus LY6 cysteine residues and is predominantly expressed in nonclassical spleen cells 1. Expression of LY6S induces shifts in inflammatory and immune response gene expression patterns, enhances viral resistance in expressing cells, and is associated with immune activation 1. LY6S shares evolutionary ancestry with the murine Ly6a subfamily gene cluster.

Sources cited
1
LY6S is an interferon-inducible GPI-linked protein expressed in spleen cells; expression induces inflammatory and immune response gene shifts, increases viral resistance, and relates to immune activation
PMID: 35440514
⚠Limited data available β€” This gene has 1 indexed publication. Summary and analysis may be incomplete.
Disease Associationsβ“˜20
alcohol drinkingOpen Targets
0.14Weak
neoplasmOpen Targets
0.10Suggestive
hepatocellular carcinomaOpen Targets
0.08Suggestive
leukemiaOpen Targets
0.07Suggestive
cancerOpen Targets
0.05Suggestive
Abruptio PlacentaeOpen Targets
0.03Suggestive
melanomaOpen Targets
0.03Suggestive
acute lymphoblastic leukemiaOpen Targets
0.03Suggestive
placenta praeviaOpen Targets
0.03Suggestive
colorectal carcinomaOpen Targets
0.02Suggestive
Ischemic strokeOpen Targets
0.02Suggestive
infectionOpen Targets
0.02Suggestive
lymphoid leukemiaOpen Targets
0.01Suggestive
Bloom syndromeOpen Targets
0.01Suggestive
precursor B-cell acute lymphoblastic leukemiaOpen Targets
0.01Suggestive
strokeOpen Targets
0.01Suggestive
pituitary tumorOpen Targets
0.01Suggestive
colitisOpen Targets
0.01Suggestive
colorectal cancerOpen Targets
0.01Suggestive
viral diseaseOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar β†—
Related Genes
LY6G6DShared pathway100%LYNX1Shared pathway100%LYPD1Shared pathway100%SLURP2Shared pathway100%PSCAShared pathway50%LY6EShared pathway33%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
Click a node to explore
LY6SLY6G6DLYNX1LYPD1SLURP2PSCALY6E
PROTEIN STRUCTURE
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AlphaFoldAI-predicted Β· UniProt P0DTL4
View on AlphaFold β†—
RankingsWhere LY6S stands among ~20K protein-coding genes
  • #19,160of 20,598
    Most Researched2
Genes detectedLY6S
Sources retrieved1 papers
Response timeβ€”
πŸ“„ Sources
1
1
PMID: 35440514
Immunohorizons Β· 2022
1.00