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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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LZTS3
leucine zipper tumor suppressor family member 3
Chromosome 20 · 20p13
NCBI Gene: 9762Ensembl: ENSG00000088899.17HGNC: HGNC:30139UniProt: O60299
25PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
postsynaptic densitydendritic spineregulation of dendritic spine morphogenesissynapsepolycystic ovary syndromeSensorineural hearing impairmenthearing lossParkinson disease
✦AI Summary

LZTS3 (leucine zipper tumor suppressor family member 3) is a tumor suppressor protein with dual roles in synaptic function and cancer regulation. In neuronal contexts, LZTS3 localizes to postsynaptic densities and dendritic spines, where it interacts with Sipa1l3/SPAR3 and likely regulates dendritic spine morphogenesis through modulation of SIPA1L1 levels 1. The protein shows allele-specific expression in brain tissue, particularly in the superior frontal gyrus, suggesting cis-regulatory mechanisms may influence its function in neurological contexts 2. In cancer, LZTS3 functions as a tumor suppressor across multiple malignancies. In colorectal adenocarcinoma, LZTS3 inhibits cell proliferation and migration by targeting the NOTCH signaling pathway and regulating TAGLN expression 3. Similarly, in lung cancer, LZTS3 suppresses tumorigenesis and radioresistance, though its function is regulated by CK1δ and β-TrCP-mediated ubiquitination through conserved degron sequences 4. Thalidomide can upregulate LZTS3 expression to reduce radiation-induced apoptosis and inflammation in oral epithelial cells 5. LZTS3 has been identified as both a protective and risky prognostic biomarker in colorectal cancer depending on the study context 67.

Sources cited
1
LZTS3 interacts with Sipa1l3/SPAR3 at postsynaptic specializations
PMID: 26364583
2
LZTS3 shows allele-specific expression in human brain tissue
PMID: 33436766
3
LZTS3 inhibits colorectal cancer cell proliferation and migration via NOTCH signaling and TAGLN regulation
PMID: 37806182
4
LZTS3 suppresses lung cancer tumorigenesis and radioresistance but is regulated by CK1δ and β-TrCP-mediated ubiquitination
PMID: 39956246
5
Thalidomide upregulates LZTS3 to reduce radiation-induced apoptosis and inflammation
PMID: 39334314
6
LZTS3 identified as a risky prognostic gene in colorectal cancer
PMID: 31893510
7
LZTS3 included in primary location-related genes for right-sided colon cancer prognosis
PMID: 41146251
Disease Associationsⓘ20
polycystic ovary syndromeOpen Targets
0.34Weak
Sensorineural hearing impairmentOpen Targets
0.27Weak
hearing lossOpen Targets
0.25Weak
Parkinson diseaseOpen Targets
0.17Weak
neoplasmOpen Targets
0.08Suggestive
chronic obstructive pulmonary diseaseOpen Targets
0.05Suggestive
cancerOpen Targets
0.03Suggestive
colorectal adenocarcinomaOpen Targets
0.02Suggestive
atypical teratoid rhabdoid tumorOpen Targets
0.02Suggestive
glioblastoma multiformeOpen Targets
0.02Suggestive
lung cancerOpen Targets
0.02Suggestive
colorectal carcinomaOpen Targets
0.02Suggestive
AnxietyOpen Targets
0.02Suggestive
astrocytomaOpen Targets
0.02Suggestive
clear cell renal carcinomaOpen Targets
0.02Suggestive
non-small cell lung carcinomaOpen Targets
0.01Suggestive
large cell medulloblastomaOpen Targets
0.01Suggestive
transitional cell carcinoma of kidneyOpen Targets
0.01Suggestive
colon adenocarcinomaOpen Targets
0.01Suggestive
lung carcinomaOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SHANK3Protein interaction96%SIPA1L3Protein interaction72%SIPA1L1Protein interaction64%TANC2Shared pathway33%ARHGAP33Shared pathway33%ARHGAP32Shared pathway25%
Tissue Expression6 tissues
Brain
100%
Ovary
49%
Heart
29%
Bone Marrow
28%
Liver
23%
Lung
21%
Gene Interaction Network
Click a node to explore
LZTS3SHANK3SIPA1L3SIPA1L1TANC2ARHGAP33ARHGAP32
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt O60299
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.65LoF Tolerant
pLIⓘ
0.17Tolerant
Observed/Expected LoF0.43 [0.29–0.65]
RankingsWhere LZTS3 stands among ~20K protein-coding genes
  • #13,014of 20,598
    Most Researched25
  • #4,690of 17,882
    Most Constrained (LOEUF)0.65
Genes detectedLZTS3
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
LZTS3/TAGLN Suppresses Cancer Progression in Human Colorectal Adenocarcinoma Through Regulating Cell Proliferation, Migration, and Actin Cytoskeleton.
PMID: 37806182
Arch Med Res · 2023
1.00
2
LZTS3 represses tumorigenesis and radioresistance via CK1δ and β-TrCP-mediated ubiquitination pathway in lung cancer.
PMID: 39956246
Cell Signal · 2025
0.90
3
Thalidomide attenuates radiation-induced apoptosis and pro-inflammatory cytokine secretion in oral epithelial cells by promoting LZTS3 expression.
PMID: 39334314
J Transl Med · 2024
0.80
4
MX1 is a novel crucial prognostic and therapeutic target inducing chemoresistance in right-sided colon cancer: insights from machine learning-based multi-omics analysis.
PMID: 41146251
Hum Genomics · 2025
0.70
5
In silico characterization of LZTS3, a potential tumor suppressor.
PMID: 16012743
Oncol Rep · 2005
0.60