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GeneE
4 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
MDH1B
malate dehydrogenase 1B
Chromosome 2 Β· 2q33.3
NCBI Gene: 130752Ensembl: ENSG00000138400.13HGNC: HGNC:17836UniProt: C9JER5
4PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
NAD+ metabolic processtricarboxylic acid cycleoxaloacetate metabolic processmalate metabolic processneurodegenerative diseaseepisodic memoryplacenta praeviaage-related macular degeneration
✦AI Summary

MDH1B (malate dehydrogenase 1B) is a metabolic enzyme with NAD+-dependent L-malate dehydrogenase activity that participates in the tricarboxylic acid cycle and malate metabolism 1. Unlike the widely expressed MDH1 and MDH2 isoforms, MDH1B is expressed only in a limited subset of tissues 1. The gene functions within a regulatory axis where CREB1 transcriptionally controls MDH1B expression; ox-LDL-induced suppression of CREB1 downregulates MDH1B, impairing malate production and subsequently disrupting mitochondrial membrane potential and ATP generation in endothelial cells 2. MDH1B overexpression restores malate levels and mitigates endothelial dysfunction, establishing the CREB1-MDH1B-malate axis as a bridge between transcriptional regulation and metabolic homeostasis 2. Clinically, reduced MDH1B expression correlates with altered TCA cycle flux in skeletal muscle of rheumatoid arthritis patients, with baseline downregulation associated with greater disease activity improvements following high-intensity interval training 3. MDH1B has been identified as a candidate susceptibility gene for erectile dysfunction through transcriptome-wide association analysis 4. However, specific mutations in MDH1B and their pathogenic mechanisms remain poorly characterized compared to other MDH isoforms 1.

Sources cited
1
MDH1B is one of three human MDH genes with limited tissue expression; general information on human MDH genetics
PMID: 39037390
2
CREB1 transcriptionally regulates MDH1B; ox-LDL suppresses this axis, impairing malate metabolism and mitochondrial function in endothelial cells
PMID: 41519486
3
MDH1B downregulation is part of altered TCA cycle flux in RA skeletal muscle and correlates with disease activity and exercise-induced improvements
PMID: 34246305
4
MDH1B identified as candidate susceptibility gene for erectile dysfunction through transcriptome-wide association study
PMID: 40145662
⚠Limited data available β€” This gene has 4 indexed publications. Summary and analysis may be incomplete.
Disease Associationsβ“˜20
neurodegenerative diseaseOpen Targets
0.21Weak
episodic memoryOpen Targets
0.15Weak
placenta praeviaOpen Targets
0.10Suggestive
age-related macular degenerationOpen Targets
0.08Suggestive
insomniaOpen Targets
0.08Suggestive
acute tonsillitisOpen Targets
0.08Suggestive
X-linked retinal dysplasiaOpen Targets
0.07Suggestive
choroidal dystrophy, central areolar, 1Open Targets
0.06Suggestive
Familial exudative vitreoretinopathyOpen Targets
0.06Suggestive
severe early-childhood-onset retinal dystrophyOpen Targets
0.06Suggestive
Stargardt diseaseOpen Targets
0.06Suggestive
reticular dystrophy of the retinal pigment epitheliumOpen Targets
0.06Suggestive
age related macular degeneration 11Open Targets
0.05Suggestive
age related macular degeneration 2Open Targets
0.05Suggestive
age related macular degeneration 4Open Targets
0.05Suggestive
age related macular degeneration 6Open Targets
0.05Suggestive
age related macular degeneration 7Open Targets
0.05Suggestive
retinitis pigmentosaOpen Targets
0.05Suggestive
retinitis pigmentosa 87 with choroidal involvementOpen Targets
0.04Suggestive
coloboma of maculaOpen Targets
0.04Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar β†—
Related Genes
IDH2Protein interaction96%CSProtein interaction95%DYTNProtein interaction75%SUCLG1Protein interaction67%FHProtein interaction63%SUCLA2Protein interaction63%
Tissue Expression6 tissues
Brain
100%
Heart
78%
Bone Marrow
53%
Ovary
49%
Lung
26%
Liver
19%
Gene Interaction Network
Click a node to explore
MDH1BIDH2CSDYTNSUCLG1FHSUCLA2
PROTEIN STRUCTURE
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AlphaFoldAI-predicted Β· UniProt Q5I0G3
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
1.13LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.87 [0.68–1.13]
RankingsWhere MDH1B stands among ~20K protein-coding genes
  • #18,613of 20,598
    Most Researched4
  • #11,629of 17,882
    Most Constrained (LOEUF)1.13
Genes detectedMDH1B
Sources retrieved4 papers
Response timeβ€”
πŸ“„ Sources
4
1
Genetics of MDH in humans.
PMID: 39037390
Essays Biochem Β· 2024
1.00
2
A cross-tissue transcriptome-wide association study reveals novel susceptibility genes for erectile dysfunction.
PMID: 40145662
Andrology Β· 2026
0.75
3
OX-LDL causes vascular endothelial injury by interfering with the CREB1-MDH1B-malate axis.
PMID: 41519486
Free Radic Biol Med Β· 2026
0.50
4
Altered skeletal muscle metabolic pathways, age, systemic inflammation, and low cardiorespiratory fitness associate with improvements in disease activity following high-intensity interval training in persons with rheumatoid arthritis.
PMID: 34246305
Arthritis Res Ther Β· 2021
0.25