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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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METTL16
methyltransferase 16, RNA N6-adenosine
Chromosome 17 · 17p13.3
NCBI Gene: 79066Ensembl: ENSG00000127804.13HGNC: HGNC:28484UniProt: B7Z3X7
78PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
S-adenosylmethionine biosynthetic processmRNA m(6)A methyltransferase activityRNA bindingRNA stem-loop bindingneurodegenerative diseaseVitiligohepatocellular carcinomacolorectal carcinoma
✦AI Summary

METTL16 is an RNA N6-methyladenosine (m6A) methyltransferase that plays critical roles in both transcriptional and post-transcriptional regulation. The protein functions as an m6A writer, depositing methylation marks on hundreds of specific mRNA targets in the nucleus, while also serving as a translation-initiation facilitator in the cytoplasm through direct interactions with eukaryotic initiation factors and ribosomal RNA 1. Unlike the METTL3-METTL14 complex, METTL16 has substrate specificity requiring both sequence motifs and specific RNA structures for methylation activity 2. The protein undergoes post-translational modifications including lactylation at K229 and K269, which enhances its function in various cellular contexts 34. METTL16 demonstrates significant disease relevance across multiple cancer types, promoting tumorigenesis in hepatocellular carcinoma, acute myeloid leukemia, and colorectal cancer through diverse mechanisms including metabolic reprogramming of branched-chain amino acid metabolism and glycolysis 567. In hepatocellular carcinoma, METTL16 confers ferroptosis resistance through the SENP3-LTF signaling axis 7. The protein's essential role in cancer cell survival and its involvement in therapeutic resistance make it an attractive target for cancer treatment 8.

Sources cited
1
METTL16 functions as both m6A writer in nucleus and translation facilitator in cytoplasm
PMID: 35145225
2
METTL16 has substrate specificity requiring sequence motifs and RNA structures
PMID: 34023900
3
METTL16 undergoes lactylation at K229 in copper stress conditions
PMID: 37863889
4
METTL16 lactylation at K269 enhances CTCF stabilization in pancreatic cancer
PMID: 40803319
5
METTL16 promotes leukemogenesis through BCAA metabolism reprogramming
PMID: 36608679
6
METTL16 promotes glycolytic metabolism in colorectal cancer
PMID: 37340443
7
METTL16 confers ferroptosis resistance through SENP3-LTF axis in hepatocellular carcinoma
PMID: 39218945
8
METTL16 is considered a potential therapeutic target in cancer
PMID: 37533128
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.35Weak
VitiligoOpen Targets
0.14Weak
hepatocellular carcinomaOpen Targets
0.11Weak
colorectal carcinomaOpen Targets
0.11Weak
neoplasmOpen Targets
0.10Suggestive
cholangiocarcinomaOpen Targets
0.09Suggestive
gastric cancerOpen Targets
0.08Suggestive
breast cancerOpen Targets
0.08Suggestive
papillary thyroid carcinomaOpen Targets
0.08Suggestive
lung adenocarcinomaOpen Targets
0.08Suggestive
urinary bladder carcinomaOpen Targets
0.08Suggestive
acute myeloid leukemiaOpen Targets
0.07Suggestive
Patent ductus arteriosusOpen Targets
0.07Suggestive
gliomaOpen Targets
0.07Suggestive
cancerOpen Targets
0.06Suggestive
type 2 diabetes mellitusOpen Targets
0.06Suggestive
non-small cell lung carcinomaOpen Targets
0.06Suggestive
coronary artery diseaseOpen Targets
0.05Suggestive
pachyonychia congenitaOpen Targets
0.05Suggestive
hemoglobin D diseaseOpen Targets
0.05Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
ZCCHC4Protein interaction100%HNRNPCProtein interaction90%HNRNPA2B1Protein interaction89%RBMXProtein interaction89%FTOProtein interaction85%MEPCEProtein interaction83%
Tissue Expression6 tissues
Brain
100%
Bone Marrow
97%
Ovary
88%
Heart
82%
Lung
51%
Liver
38%
Gene Interaction Network
Click a node to explore
METTL16ZCCHC4HNRNPCHNRNPA2B1RBMXFTOMEPCE
PROTEIN STRUCTURE
Preparing viewer…
PDB6DU4 · 1.70 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.49Moderately Constrained
pLIⓘ
0.99Intolerant
Observed/Expected LoF0.33 [0.23–0.49]
RankingsWhere METTL16 stands among ~20K protein-coding genes
  • #6,086of 20,598
    Most Researched78
  • #2,906of 17,882
    Most Constrained (LOEUF)0.49 · top quartile
Genes detectedMETTL16
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Lactylation of METTL16 promotes cuproptosis via m
PMID: 37863889
Nat Commun · 2023
1.00
2
A comprehensive review of m6A/m6Am RNA methyltransferase structures.
PMID: 34023900
Nucleic Acids Res · 2021
0.90
3
Tumor-associated Schwann cell remodeling under metabolic stress via lactate sensing orchestrates pancreatic ductal adenocarcinoma development.
PMID: 40803319
Cell Metab · 2025
0.80
4
METTL16-SENP3-LTF axis confers ferroptosis resistance and facilitates tumorigenesis in hepatocellular carcinoma.
PMID: 39218945
J Hematol Oncol · 2024
0.70
5
METTL16 drives leukemogenesis and leukemia stem cell self-renewal by reprogramming BCAA metabolism.
PMID: 36608679
Cell Stem Cell · 2023
0.60